Detailed information on CNT30575513


BLAST search results

BLAST vs Swiss-Prot:
sp|P33624|TBA2_ANEPH, E-value = 7e-57

BLAST vs NONCODE:
NONGMAT000220, E-value = 6e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224141Oryza barthiiHordeum vulgare32.8436.0393.47245forward
CNT3086234Oryza barthiiVigna radiata26.0136.682.47194forward
CNT30482824Oryza barthiiChara braunii29.6229.0482.35221forward
CNT30593783Oryza barthiiEragrostis curvula25.8736.5592.23193forward

Expression of CNT30575513

Peptides detected in this lncRNA

>peptide 1 (97 aa)
LGVHEVELVVDAGEHLHDAGGVGDHAHGPLHLGEVAAGDDAGRLVVDAALEPRRAPVHELDGALGLDGGDGGVHVLGHDVAAGRTWPSWRMARRRCW*

>peptide 2 (97 aa)
MPHLNPVGHQSTNWMVRLVLMVATAAFTSLGTTSPRVALGHHGGWLEGAVGDLGNGELLMVGLLRRDHWSVGRKHEVDPWVGHKVGRSMSRERRQMS*

>peptide 3 (33 aa)
MASLSSRTATSVCSRREWVERTLLYGSTTEVET*

>peptide 4 (45 aa)
RLEYMRSNLWSMRENTSTTLVELEIMHTALCTLARSPLGTTLGGW*

Sequence

>CNT30575513
CGCTTGGAGTACATGAGGTCGAACTTGTGGTCGATGCGGGAGAACACCTCCACGACGCTGGTGGAGTTGGAGATCATGCACACGGCCCTCTGCACCTTGG
CGAGGTCGCCGCTGGGGACGACGCTGGGCGGCTGGTAGTTGATGCCGCACTTGAACCCCGTCGGGCACCAGTCCACGAATTGGATGGTGCGCTTGGTCTT
GATGGTGGCGACGGCGGCGTTCACGTCCTTGGGCACGACGTCGCCGCGGGTCGCACTTGGCCATCATGGAGGATGGCTCGAAGGCGCTGTTGGTGATCTC
GGCAACGGAGAGTTGCTCATGGTAGGCCTTCTCCGCAGAGATCACTGGAGCGTAGGACGAAAGCATGAAGTGGATCCTTGGGTAGGGCACAAGGTTGGGC
GCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTATCAAGCAGAACAGCAACATCAGTGTGCTCAAGGAGGGAGTGGGTAGAGAGGAC
ACTGTTGTATGGCTCAACCACAGAGGTGGAGACCTGAGGGGATGGGTACACAGTGAACCCAAGCTTGGACTTCTTGCCATAGTCCACAGAAAGGCGCTCC
AGGAGAAGGGAACCAAGACCAGAGCCCGTTCCACCTCCAACAGCGTTGAACACAAGGAAACCTTGGAGACCAGTGCAGTTGTCAGCAAGCTTCCTGATGC
GGTCAAGGCACAGATCAACAATCTCCTTGCCAACTGTAAAGATTTA