SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30520631 Setaria italica II:43195854-43197347 (+) coding (0.204)3e-104 (sp|Q07473|CB4A_ARATH) 97 31.01 2Conserved counterparts:
CNT30520630 Setaria italica II:8045840-8047034 (+) noncoding (-0.0004096)- 52 10.53 2
CNT30520627 Setaria italica II:47527037-47527845 (+) coding (0.482)- 84 3.46 2Conserved counterparts:
CNT30520625 Setaria italica II:46211956-46212921 (+) coding (0.267)- 68 5.2 1
CNT30520623 Setaria italica II:36338618-36341005 (+) noncoding (-0.090112)- 50 9.26 2
CNT30520616 Setaria italica II:31252726-31254642 (-) coding (0.379)- 76 0.19 4Conserved counterparts:
CNT30520615 Setaria italica II:3097282-3097749 (-) coding (0.496)- 98 1.8 2
CNT30520613 Setaria italica II:7732435-7735097 (-) coding (0.119)- 92 49.51 3
CNT30520611 Setaria italica II:45348548-45349156 (-) coding (0.24)- 97 144.12 2
CNT30520609 Setaria italica II:43195859-43204410 (+) coding (0.154)1e-61 (sp|Q9S7W1|CB4C_ARATH) 57 7.89 3Conserved counterparts:
CNT30520607 Setaria italica II:47527243-47527903 (+) coding (0.308)5e-18 (sp|I1JIC4|ERD15_SOYBN) 50 0.39 2Conserved counterparts:
CNT30520605 Setaria italica II:43195859-43204410 (+) coding (0.292)1e-19 (sp|P10707|CB2D_SOLLC) 64 1.1 3Conserved counterparts:
CNT30520603 Setaria italica II:28876971-28877329 (+) noncoding (-0.212992)- - 28.35 1
CNT30520600 Setaria italica II:43274986-43275677 (-) noncoding (-0.134349)4e-92 (sp|Q9S7M0|CB3_ARATH) 45 0.08 3Conserved counterparts:
CNT30520598 Setaria italica II:27055458-27056152 (+) coding (0.357)- 92 32.14 1
CNT30520594 Setaria italica II:43195882-43197123 (+) coding (0.165)- 57 0.19 3Conserved counterparts:
CNT30520593 Setaria italica II:46406434-46407216 (-) noncoding (-0.0315392)- 61 0.99 2
CNT30520592 Setaria italica II:31597776-31598417 (+) coding (0.484)- 78 0.16 2Conserved counterparts:
CNT30520590 Setaria italica II:34760376-34769421 (+) noncoding (-0.114688)2e-69 (sp|Q651X6|CSLE6_ORYSJ) 47 54.56 2
CNT30520589 Setaria italica II:13906281-13908729 (+) coding (0.336)7e-87 (sp|Q84RL7|PIP21_MAIZE) 87 0.75 3Conserved counterparts:
CNT30520588 Setaria italica II:42530578-42531628 (-) noncoding (-0.07168)- 40 22.53 2
CNT30520583 Setaria italica II:41296467-41298170 (+) coding (0.052)- 89 11.62 2
CNT30520581 Setaria italica II:10814299-10825193 (-) noncoding (-0.192512)- 51 3.46 2
CNT30520579 Setaria italica II:43274525-43275677 (-) coding (0.276)2e-128 (sp|Q9S7M0|CB3_ARATH) 62 4.65 3Conserved counterparts:
CNT30520577 Setaria italica II:48796720-48797202 (-) noncoding (-0.0483328)9e-68 (sp|Q9FXB2|GOLS2_ARATH) 74 0.46 2
CNT30520575 Setaria italica II:35152113-35152936 (-) coding (0.243)5e-54 (sp|Q00327|PSAG_HORVU) 91 0.54 2Conserved counterparts:
CNT30520572 Setaria italica II:38500034-38501923 (+) noncoding (-0.0561152)- 78 160.94 2Conserved counterparts:
CNT30520570 Setaria italica II:43195858-43197123 (+) coding (0.257)7e-31 (sp|Q9SDM1|CB121_HORVU) 62 57.13 2Conserved counterparts:
CNT30520569 Setaria italica II:38548648-38554003 (-) coding (0.354)- 90 2.6 4Conserved counterparts:
CNT30520568 Setaria italica II:32221558-32221848 (-) noncoding (-0.124109)5e-22 (sp|Q10717|CYSP2_MAIZE) 68 30.24 2Conserved counterparts:
CNT30520567 Setaria italica II:29093111-29094831 (+) coding (0.091)- 98 5.88 2
CNT30520566 Setaria italica II:27671057-27673622 (+) coding (0.176)- 86 5.54 2
CNT30520564 Setaria italica II:42858481-42859360 (+) coding (0.365)2e-64 (sp|Q8L4N1|PHO34_ARATH) 86 18.48 1Conserved counterparts:
CNT30520563 Setaria italica II:25064123-25065629 (+) coding (0.104)- 87 2.69 3
CNT30520562 Setaria italica II:2528017-2528488 (-) noncoding (-0.057344)0.0000002 (sp|P42051|PSAK_CUCSA) 76 14.82 2Conserved counterparts:
CNT30520559 Setaria italica II:15729712-15731116 (+) coding (0.245)- 65 358.37 2Conserved counterparts:
CNT30520556 Setaria italica II:23393725-23397296 (+) noncoding (-0.0540672)- 93 2 3
CNT30520555 Setaria italica II:47854493-47855102 (+) noncoding (-0.0888832)- 50 0.47 2
CNT30520554 Setaria italica II:47991014-47991760 (-) noncoding (-0.101581)- 92 1.95 2
CNT30520553 Setaria italica II:41488905-41489486 (+) coding (0.318)4e-28 (sp|Q6Z4A7|APR1_ORYSJ) 94 0.66 2Conserved counterparts:
CNT30520552 Setaria italica II:2047415-2048370 (-) coding (0.16)- 87 27.63 2
CNT30520551 Setaria italica II:5549767-5553453 (+) coding (0.221)- 97 2.36 3
CNT30520550 Setaria italica II:45009547-45010470 (+) coding (0.254)- 99 18.23 2
CNT30520545 Setaria italica II:45771752-45774144 (-) coding (0.119)- 82 13.75 2
CNT30520544 Setaria italica II:40707660-40708104 (-) noncoding (-0.018432)0.000006 (sp|P0C8M9|SRP1_MAIZE) 73 0.72 2
CNT30520542 Setaria italica II:19109659-19111738 (-) coding (0.128)- 82 17.66 1
CNT30520541 Setaria italica II:35152120-35152730 (-) coding (0.213)7e-53 (sp|Q00327|PSAG_HORVU) 63 3.48 3Conserved counterparts:
CNT30520540 Setaria italica II:45420308-45420883 (+) noncoding (-0.0741376)- 86 39.96 2
CNT30520537 Setaria italica II:31968274-31969230 (+) coding (0.122)- 62 0.32 2
CNT30520536 Setaria italica II:28371869-28372782 (-) noncoding (-0.0765952)- 53 0.74 2Conserved counterparts: