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Detailed information on CNT30708177


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 7e-102

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695032Glycine maxOryza sativa29.0946.4382.35306forward
CNT30672010Glycine maxSetaria viridis21.8639.0585.22230forward
CNT30520234Glycine maxSetaria italica51.4351.2381.89541forward
CNT30640553Glycine maxNymphaea colorata26.8135.0381.91282forward
CNT30513329Glycine maxJuglans regia27.5745.1785.52290forward
CNT30375654Glycine maxArabidopsis thaliana14.0730.5881.08148forward
CNT30500595Glycine maxCoffea canephora18.7325.8981.73197forward
CNT30282946Glycine maxChenopodium quinoa29.0930.0980.39306forward
CNT30401900Glycine maxBeta vulgaris28.4230.5781.94299forward
CNT30526506Glycine maxPhaseolus vulgaris30.9927.5193.56326forward
CNT30485914Glycine maxOlea europaea30.2339.782.7318forward
CNT30502928Glycine maxNicotiana attenuata11.8835.4185.6125forward
CNT30386996Glycine maxTriticum turgidum18.0635.1281.05190forward
CNT30436081Glycine maxAegilops tauschii18.0637.1882.11190forward
CNT30659938Glycine maxTriticum dicoccoides21.141.4281.53222forward
CNT30229721Glycine maxAnanas comosus30.713.7683.59323forward
CNT30219415Glycine maxKalanchoe fedtschenkoi19.3965.3880.39204forward
CNT3067780Glycine maxLeersia perrieri9.8921.7687.5104forward
CNT30213985Glycine maxHelianthus annuus39.4578.1579.52415forward
CNT30680618Glycine maxTriticum urartu28.3331.0182.55298forward
CNT30620949Glycine maxCajanus cajan31.8431.1393.43335forward
CNT30596550Glycine maxOryza meridionalis17.0222.0483.8179forward
CNT30360911Glycine maxLactuca sativa15.5936.0483.54164forward
CNT30328621Glycine maxAsparagus officinalis13.8848.9985.62146forward
CNT30147934Glycine maxBrachypodium distachyon12.4534.3885.5131forward
CNT30581058Glycine maxEchinochloa crusgalli24.8126.7481.99261forward
CNT30116923Glycine maxOryza nivara22.4328.3784.32236forward
CNT30604352Glycine maxOryza punctata14.3526.2285.43151forward
CNT30556732Glycine maxPanicum hallii16.4422.1884.97173forward
CNT30551395Glycine maxOryza brachyantha28.4234.5382.94299forward
CNT30725365Glycine maxLupinus angustifolius31.7520.6281.74334forward
CNT3039307Glycine maxMarchantia polymorpha9.8931.3382.69104forward

Expression of CNT30708177

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MMSPATFFARFWSSESNSNCRYSAGFPSPNGSNP*

>peptide 2 (63 aa)
LQWPQSNFLPLPFIVILTSSVFFTVPLQFHVTSFSQVLLIQLCRKCLITTQSRRRRKRLLQYN*

>peptide 3 (45 aa)
MMVVWSGSLKWVAQLLSGPLPVAAAWTAKPKKPTMARRACLISAN*

>peptide 4 (42 aa)
PMASIQFPAITFHSDLNLISIFYRPSPISRYKFFTSTTNPAM*

Sequence

>CNT30708177
CTCCAATGGCCTCAATCCAATTTCCTGCCATTACCTTTCATAGTGATCTTAACCTCATCAGTATTTTTTACCGTCCCTCTCCAATTTCACGTTACAAGTT
TTTCACAAGTACTACTAATCCAGCTATGTAGAAAATGTTTAATTACAACCCAAAGCCGAAGAAGAAGAAAAAGACTTTTACAATATAACTAGAATGACCA
GGCACAAGAAAGACTATTCTTCTTCTTTTGCTTCTTCTTAAGAGGAGGATGAGAAGGTGTCAATGATGGTTGTGTGGAGTGGGTCACTCAAGTGGGTGGC
CCAGTTGTTGAGCGGGCCCTTGCCAGTGGCGGCAGCTTGGACTGCAAAGCCCAAGAAGCCCACCATGGCGAGACGGGCGTGCTTGATCTCCGCCAATTGA
AGGGTGGCTTTCTTCTCTGGATCTGAGGCCAGGCCCAGTGGGTCGAAGTAACTGCCACCTGGGTACAGCCTCTTTTCTGGGTCCAGCTCTGCGTTCCTCT
GGAACTCTATGTAGCCAATTACGAGAACCTCGATCCAGATCAGTGTGGTGATTGAGAATGGAAGTGGTTGCCCTAGTGGCGAGCATGGCCCACCTCCCGT
GAATGAGCTCGCACTCGCGGAACCTCTGCAGCCCGAACACCTCGCTGTAGGGCTGGAACGGCGTGGACTTCACGTCCGCGAGCTCGGTCCTGGTCCCAAT
GATGTCCCCAGCCACGTTCTTCGCAAGGTTCTGGTCCAGCGAGTCCAACTCGAACTGCAGGTACTCGGCGGGCTTCCCTAGCCCAAATGGGTCGAATCCG
TAGTCTCCGACAAGGCTCCCATCCAGGGGCCTATCGGAGCTAGAGCCCGACCCCCTGGAAACTTTCTTCGGGGCGGCGGCTTTCTTCTTGCCAAACCCGA
ACCGGGCCTGCACCCGCCCCGCCCCGGAGTGGGCCTCCAGGAGGCGCGTCCCCATGAAGGACGAGGTGGCTGCTGCTGTTGCGGTGGCCATGCTGGGCTT
ATGCTAAATTGGGCCGGTTGAGAGAAAAATTGAGTTGGGAGAATTAGTGGTT