SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30519770 Setaria italica I:31747405-31748766 (+) noncoding (-0.0413696)- 80 6.03 2
CNT30519767 Setaria italica I:41981397-41981868 (+) noncoding (-0.0917504)- 62 2.41 2
CNT30519766 Setaria italica I:22759114-22761485 (-) noncoding (-0.0086016)- 89 6.75 2
CNT30519764 Setaria italica I:8424461-8426826 (-) noncoding (-0.008192)- 63 27.2 3
CNT30519757 Setaria italica I:28258518-28259835 (+) coding (0.179)1e-37 (sp|Q6YTI3|TRL4_ORYSJ) 31 12.35 3
CNT30519755 Setaria italica I:28114440-28115393 (-) noncoding (-0.212992)- 53 0.27 1
CNT30519752 Setaria italica I:228942-229300 (-) noncoding (-0.0004096)- - 92.76 1
CNT30519750 Setaria italica I:38221866-38222838 (-) coding (0.339)2e-83 (sp|Q07300|ATPD_SORBI) 80 1.52 2Conserved counterparts:
CNT30519749 Setaria italica I:7404506-7406874 (-) coding (0.264)- 84 5.5 2
CNT30519748 Setaria italica I:40853489-40855311 (+) noncoding (-0.094208)- 41 2.54 2
CNT30519747 Setaria italica I:24027942-24028461 (-) noncoding (-0.049152)- 67 4.74 1
CNT30519745 Setaria italica I:37907065-37908042 (-) coding (0.202)8e-131 (sp|Q6Z2T6|CHLP_ORYSJ) 83 2.67 2Conserved counterparts:
CNT30519744 Setaria italica I:1285919-1298181 (+) coding (0.245)- 52 0.13 3
CNT30519742 Setaria italica I:1285919-1287376 (+) coding (0.392)- 58 85.85 2
CNT30519739 Setaria italica I:8752522-8752804 (+) noncoding (-0.0618496)- 70 1.21 2
CNT30519738 Setaria italica I:22097784-22098484 (-) noncoding (-0.0339968)3e-46 (sp|Q10716|CYSP1_MAIZE) 37 499.33 2Conserved counterparts:
CNT30519732 Setaria italica I:33821843-33822223 (-) noncoding (-0.141722)5e-38 (sp|Q6EU94|PIP11_ORYSJ) 72 0.98 2Conserved counterparts:
CNT30519730 Setaria italica I:6293488-6294112 (+) noncoding (-0.100352)- 92 80.62 2
CNT30519729 Setaria italica I:3596125-3599032 (+) coding (0.131)- 94 72.36 2
CNT30519728 Setaria italica I:10300232-10300845 (+) noncoding (-0.004096)2e-34 (sp|O48890|NRPB4_ARATH) 92 0.82 2Conserved counterparts:
CNT30519723 Setaria italica I:25817513-25818299 (-) coding (0.424)2e-37 (sp|Q6H754|SAP5_ORYSJ) 95 0.4 2
CNT30519722 Setaria italica I:6953212-6954853 (-) noncoding (-0.028672)3e-89 (sp|Q94HW2|POLR1_ARATH) 77 14 1
CNT30519719 Setaria italica I:81530-82026 (+) noncoding (-0.159744)- 78 0.01 2
CNT30519716 Setaria italica I:38221855-38222787 (-) coding (0.305)6e-63 (sp|Q07300|ATPD_SORBI) 80 98.17 2Conserved counterparts:
CNT30519711 Setaria italica I:38159998-38162950 (-) coding (0.256)- 92 50.96 3
CNT30519709 Setaria italica I:35998047-35998289 (-) noncoding (-0.117146)- 69 0 2
CNT30519705 Setaria italica I:41272986-41274057 (+) noncoding (-0.0344064)- 80 0 2Conserved counterparts:
CNT30519701 Setaria italica I:10241404-10243179 (+) coding (0.303)2e-68 (sp|P49316|CATA2_NICPL) 74 0.26 3Conserved counterparts:
CNT30519699 Setaria italica I:32077031-32152550 (+) noncoding (-0.0290816)- 76 3.55 3
CNT30519697 Setaria italica I:29580713-29581380 (+) noncoding (-0.043008)3e-22 (sp|M1BJF6|JOKA2_SOLTU) 100 0.23 2
CNT30519696 Setaria italica I:8773308-8774800 (-) noncoding (-0.0700416)- 76 9.01 2Conserved counterparts:
CNT30519694 Setaria italica I:11319121-11319403 (+) noncoding (-0.121651)- - 5.98 2
CNT30519692 Setaria italica I:37670668-37671442 (+) coding (0.15)- 32 33.94 2
CNT30519684 Setaria italica I:37907368-37908042 (-) coding (0.14)- 35 0.43 2Conserved counterparts:
CNT30519682 Setaria italica I:32938618-32939065 (-) noncoding (-0.106496)- 33 25.93 2
CNT30519680 Setaria italica I:35625712-35627211 (-) coding (0.065)- 48 12.29 3
CNT30519679 Setaria italica I:33189745-33192910 (-) noncoding (-0.012288)- 59 3.87 4
CNT30519678 Setaria italica I:9739159-9740083 (+) coding (0.424)- 70 6.85 3
CNT30519677 Setaria italica I:9586466-9587396 (+) coding (0.089)- 40 74.35 2Conserved counterparts:
CNT30519676 Setaria italica I:37525753-37526208 (+) noncoding (-0.0004096)- 51 34.27 1
CNT30519674 Setaria italica I:41077282-41077950 (-) noncoding (-0.012288)- - 0.41 2
CNT30519670 Setaria italica I:36890085-36892855 (-) coding (0.196)- 33 3.79 2
CNT30519668 Setaria italica I:31770927-31771420 (+) coding (0.338)- 81 0.58 2Conserved counterparts:
CNT30519665 Setaria italica I:36798397-36801052 (-) noncoding (-0.0897024)- 99 3 2
CNT30519663 Setaria italica I:26086278-26088889 (-) noncoding (-0.098304)- 61 5.09 2
CNT30519662 Setaria italica I:29656034-29656738 (+) noncoding (-0.004096)- 46 0.27 2
CNT30519661 Setaria italica I:2307666-2309648 (-) coding (0.303)4e-64 (sp|Q6EUG4|HFC2A_ORYSJ) 87 4.22 2Conserved counterparts:
CNT30519660 Setaria italica I:40276368-40277081 (-) noncoding (-0.0618496)5e-31 (sp|Q9SK39|SBP3_ARATH) 74 2.42 2Conserved counterparts:
CNT30519659 Setaria italica I:26536248-26537055 (+) coding (0.381)5e-40 (sp|Q9SRN0|NHL1_ARATH) 71 0.19 2Conserved counterparts: