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Detailed information on CNT30102551


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 5e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695034Oryza rufipogonOryza sativa62.6391.6399.83580forward
CNT30671670Oryza rufipogonSetaria viridis8.120.9597.3375forward
CNT30520570Oryza rufipogonSetaria italica21.2720.1496.45197forward
CNT30640430Oryza rufipogonNymphaea colorata21.7143.7987.56201forward
CNT30289853Oryza rufipogonTriticum aestivum21.625.6195.5200forward
CNT30221234Oryza rufipogonHordeum vulgare17.8227.5596.36165forward
CNT30562744Oryza rufipogonActinidia chinensis14.1521.189.31131forward
CNT30587569Oryza rufipogonMusa acuminata12.133.4391.96112forward
CNT30554457Oryza rufipogonOryza glaberrima43.0933.2299.5399forward
CNT30244083Oryza rufipogonAvena sativa25.8148.7891.63239forward
CNT30659938Oryza rufipogonTriticum dicoccoides17.630.4193.87163forward
CNT30452520Oryza rufipogonSaccharum spontaneum23.5414.5494.5218forward
CNT30132393Oryza rufipogonLolium perenne12.8520.2797.48119forward
CNT30229721Oryza rufipogonAnanas comosus22.578.989209forward
CNT3067780Oryza rufipogonLeersia perrieri13.1725.5297.54122forward
CNT30680618Oryza rufipogonTriticum urartu21.620.8194.5200forward
CNT30338969Oryza rufipogonEragrostis tef20.5230.6994.74190forward
CNT30596509Oryza rufipogonOryza meridionalis48.1629.3496.19446forward
CNT30360911Oryza rufipogonLactuca sativa10.4821.3282.4797forward
CNT30370757Oryza rufipogonOryza glumipatula42.1281.76100390forward
CNT30105722Oryza rufipogonOryza longistaminata11.9939.2293.69111forward
CNT30147934Oryza rufipogonBrachypodium distachyon21.2751.7194.92197forward
CNT30577064Oryza rufipogonOryza barthii60.0472.7795.86556forward
CNT30581265Oryza rufipogonEchinochloa crusgalli25.9246.0796.67240forward
CNT30117066Oryza rufipogonOryza nivara48.3865.69100448forward
CNT30604352Oryza rufipogonOryza punctata62.74100.8788.47581forward

Expression of CNT30102551

Peptides detected in this lncRNA

>peptide 1 (67 aa)
NFININTCQVKSMQCAYVHSQSHSLSQIPRSIDRCTSGCINSSSWVFLYYKSPPCKSPLTTNPALLI*

>peptide 2 (61 aa)
MVVWSGSLRWVAQLLRGPLPVAAACTAKPRKATMARRACLISASCSRSFFSGSDANPSGSK*

>peptide 3 (37 aa)
MQVAINHQPSSPNLSSNQQKDDLSSLHTLPARSSSQN*

>peptide 4 (42 aa)
MCIHSHTHLVKYQDRSIDVQVDALIHHLGCSYITNHHHASRH*

>peptide 5 (42 aa)
MTSPLSIPSQLARHHKTKPRARTHTNASIPFELRAKELKLRG*

Sequence

>CNT30102551
TAACTTTATTAATATCAATACATGTCAGGTAAAGTCTATGCAGTGTGCATATGTGCATTCACAGTCACACTCACTTAGTCAAATACCAAGATCGATCGAT
CGATGTACAAGTGGATGCATTAATTCATCATCTTGGGTGTTCTTATATTACAAATCACCACCATGCAAGTCGCCATTAACCACCAACCCAGCTCTCCTAA
TTTAAGTAGTAATCAACAAAAGGATGACCTCTCCTCTCTCCATACCCTCCCAGCTCGCTCGTCATCACAAAACTAAACCGCGCGCGCGAACGCACACCAA
CGCATCGATCCCGTTTGAATTGCGCGCGAAAGAGCTTAAATTAAGAGGATGAGGAGAAGGTGTCGAAGATGGTGGTGTGGAGCGGGTCGCTGAGGTGGGT
GGCCCAGTTGTTGAGGGGCCCCTTGCCGGTGGCGGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGGGCGTGCTTGATCTCCGCCAGC
TGCAGCCGCTCCTTCTTCTCCGGGTCCGACGCCAACCCGAGCGGGTCGAAGTAGGACCCCCCCGGGTACGACGACCCATCCACCAGCTCCACCTGAAAAA
CACCATCGGACCATTCCTACGTCAGTGTCATCATCCTCGTCCGCGGCGCCGGCGATACGTAGTAACCAGGGTTTTAAATCTTTAGCTATAACTATTTAAA
AAAAGATGTAGCAATTTGTTCTCATGTACAATTTAGTCATAGCTGCCACTATTTTGAGAGGCTAAACGCTAAATGTTTTAGCCCGCTAGCTATTTGAAAC
AATGGTAGTGAGAAACGCCCAGAGGTTTTTCGGCTATCCCCACGGGCTAGACGACCTGGATTTGAAGCCTTACTCTTTCTAATTATTTGATATAATAGGT
CATTTTTTAATATTTGCTTTTTAAAA