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Detailed information on CNT30708157


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 8e-92

BLAST vs NONCODE:
NONPOPT001747, E-value = 8e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30290078Glycine maxTriticum aestivum29.434.5584.47264forward
CNT30244040Glycine maxAvena sativa29.5134.2884.15265forward
CNT30357882Glycine maxLactuca sativa29.9638.2680.67269forward
CNT30112169Glycine maxFicus carica21.8311.6982.14196forward

Expression of CNT30708157

Peptides detected in this lncRNA

>peptide 1 (34 aa)
HVTSFSQVLLIQLCRKCLITTQSRRRRKRLLQYN*

>peptide 2 (34 aa)
MMSPATFFARFWSSESNSNCRYSAGFPSPNGSNP*

>peptide 3 (29 aa)
MGRIRSLRQGSHPGTRAPWRPDTTGAYRS*

Sequence

>CNT30708157
CACGTTACAAGTTTTTCACAAGTACTACTAATCCAGCTATGTAGAAAATGTTTAATTACAACCCAAAGCCGAAGAAGAAGAAAAAGACTTTTACAATATA
ACTAGAATGACCAGGCACAAGAAAGACTATTCTTCTTCTTTTGCTTCTTCTTAAGAGGAGGATGAGAAGGTGTCAATGATGGTTGTGTGGAGTGGGTCAC
TCAAGTGGGTGGCCCAGTTGTTGAGCGGGCCCTTGCCAGGTGGCTTTCTTCTCTGGATCTGAGGCCAGGCCCAGTGGGTCGAAGTAACTGCCACCTGGGT
ACAGCCTCTTTTCTGGGTCCAGCTCTGCGTTCCTCTGGAACTCTATGTAGCCAATTACGAGAACCTCGATCCAGATCAGTGTGGTGATTGAGAATGGAAG
TGGTTGCCCTAGTGGCGAGCATGGCCCACCTCCCGTGAATGAGCTCGCACTCGCGGAACCTCTGCAGCCCGAACACCTCGCTGTAGGGCTGGAACGGCGT
GGACTTCACGTCCGCGAGCTCGGTCCTGGTCCCAATGATGTCCCCAGCCACGTTCTTCGCAAGGTTCTGGTCCAGCGAGTCCAACTCGAACTGCAGGTAC
TCGGCGGGCTTCCCTAGCCCAAATGGGTCGAATCCGTAGTCTCCGACAAGGCTCCCATCCAGGTACTCGGGCGCCTTGGCGCCCGGATACCACAGGGGCC
TATCGGAGCTAGAGCCCGACCCCCTGGAAACTTTCTTCGGGGCGGCGGCTTTCTTCTTGCCAAACCCGAACCGGGCCTGCACCCGCCCCGCCCCGGAGTG
GGCCTCCAGGAGGCGCGTCCCCATGAAGGACGAGGTGGCTGCTGCTGTTGCGGTGGCCATGCTGGGCTTATGCTAAATTGGGCCGGTTGAGAGAAAAA