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Detailed information on CNT30139319


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6K215|PIP22_ORYSJ, E-value = 2e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Lolium perenneOryza sativa20.2630.9486.92237forward
CNT30671184Lolium perenneSetaria viridis15.3832.0388.89180forward
CNT30520501Lolium perenneSetaria italica27.6113.4486.38323forward
CNT30535437Lolium perenneEucalyptus grandis10.6835.0181.6125forward
CNT30548370Lolium perenneIpomoea triloba5.5627.986.1565forward
CNT30712585Lolium perenneGlycine max4.4422.2292.3152forward
CNT30190473Lolium perenneSecale cereale31.3748.6194.82367forward
CNT30289867Lolium perenneTriticum aestivum21.7955.4387.84255forward
CNT30225926Lolium perenneHordeum vulgare14.7925.4895.38173forward
CNT30387873Lolium perenneTriticum turgidum19.2344.2987.11225forward
CNT30569510Lolium perenneActinidia chinensis5.2129.3396.7261forward
CNT30592144Lolium perenneMusa acuminata1050.8794.02117forward
CNT30553402Lolium perenneOryza glaberrima10.0922.5695.76118forward
CNT30437070Lolium perenneAegilops tauschii26.0761.7490.16305forward
CNT30254684Lolium perenneAvena sativa6.153297.2272forward
CNT30450547Lolium perenneSaccharum spontaneum7.6928.9484.4490forward
CNT30227632Lolium perenneAnanas comosus12.2221.2290.91143forward
CNT30218729Lolium perenneKalanchoe fedtschenkoi5.3821.7288.8963forward
CNT30214941Lolium perenneHelianthus annuus4.721.5790.9155forward
CNT30681057Lolium perenneTriticum urartu21.9725.2289.88257forward
CNT30362596Lolium perenneSorghum bicolor16.4132.4984.9192forward
CNT30596194Lolium perenneOryza meridionalis9.8326.4495.65115forward
CNT30370054Lolium perenneOryza glumipatula10.0922.5695.76118forward
CNT30109688Lolium perenneOryza longistaminata9.1520.1996.26107forward
CNT30318651Lolium perenneAsparagus officinalis9.7433.6381.58114forward
CNT30148068Lolium perenneBrachypodium distachyon12.0524.3584.4141forward
CNT30102682Lolium perenneOryza rufipogon16.542.3283.42193forward
CNT30575194Lolium perenneOryza barthii8.3847.892.8698forward
CNT30116009Lolium perenneOryza nivara23.1633.2990.41271forward
CNT30604398Lolium perenneOryza punctata22.5611.1782.95264forward
CNT30113851Lolium perenneFicus carica13.7658.1289.44161forward

Expression of CNT30139319

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MYSPGCGSRGRCAWGRWRRRRCRRGRRSCRRRPRRCRGCRRRCRRRRWC*

>peptide 2 (38 aa)
MAGSTMYSLFLKVPCKVVRMFSRYIIKASCSNAMSKAE*

>peptide 3 (30 aa)
MPPKAQAMPRMPTPLQAASVVLTVGSDWCL*

>peptide 4 (46 aa)
MIELVASDQSEGLFSKALCALTYCCTTALEKRIRRKVRKHITYGSF*

Sequence

>CNT30139319
ATATAAATATTCAATTATTTTACCAGCAATTCGAGTTTAACTTACAAGGACATTAAATTAGTTGCACTAGAATGTTTAATTAATTGTAGGTAAAACCTTG
CATCCATAGGTGCATGGAAAGTGCTATGTGGTATCAATAAAAAAGTTTAAAAGACTGTATGGCAGGATCGACCATGTACAGTCTATTTCTGAAGGTTCCT
TGCAAAGTTGTTAGAATGTTTTCCCGATACATTATTAAAGCAAGTTGTTCGAATGCCATGTCAAAAGCAGAGTAAGTACAAGGTCAACGACTTCGACAAC
ACTCGCTGGCCATATAGCATAACCCAGAAGCATTAATTCCACCGTGATCAATGTACTCACCGGGATGTGGGAGTCGCGGGCGTTGCGCTTGGGGTCGGTG
GCGGAGAAGACGGTGTAGACGAGGACGAAGATCATGCCGCCGAAGGCCCAGGCGATGCCGAGGATGCCGACGCCGCTGCAGGCGGCGTCGGTGGTGTTGA
CGGTGGGGTCCGACTGGTGCTTGTAGCCGATGACGGTGGCGACCGTGATGTAGAGGAAGAGGAGCGTGGCGACGAACTCGGCGATCACCGCGCGGTACAG
CGACCACTTGGTGAGCTCCTCGAAGTCGACGATCGGCGCCGGGGGAGGGTCCGAGTAGTCCTTGGCCGAGAACTCGCCCCCCTCGGGTGCCGCCTCAATG
TCCTTCGCCATTGCTAGCTTGATTAACTAGTGCCCTGCCCTGTGAGCTGTGTTTGCTGCAGTTGTGTGTGGTGTGAGGCGATAGGAGAGAGCTCAGGTAT
ATATGGGGAGCCAGAGCGAGCTCATCATCAGCTCGACTTTGGCTTCGTTAAGGGCGGGGCAGATTGATTATTAGTGAGGGATAAGGTTTTGTGCTTAATT
TAGGGGAGATTTTGGTTATAATTTGCCGCCCACAACCGACTATGCCATCATCGATAGGTCATTTCGGAGCCTAATGATCGAACTGGTGGCTAGCGATCAA
TCGGAGGGGCTATTTTCTAAGGCACTATGCGCGCTTACGTACTGTTGTACTACTGCTCTGGAAAAAAGAATACGTAGAAAGGTCAGAAAGCACATCACTT
ATGGCAGCTTCTAATTTAGCTAGCGTGGTCAGTAACTCATCAGCGGTGATGGTATATAGCGACGTTTAGC