CANTATAdb - search

Detailed information on CNT30139319

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6K215|PIP22_ORYSJ, E-value = 2e-57

BLAST vs NONCODE: nothing found

Expression of CNT30139319

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MYSPGCGSRGRCAWGRWRRRRCRRGRRSCRRRPRRCRGCRRRCRRRRWC*

>peptide 2 (38 aa)
MAGSTMYSLFLKVPCKVVRMFSRYIIKASCSNAMSKAE*

>peptide 3 (30 aa)
MPPKAQAMPRMPTPLQAASVVLTVGSDWCL*

>peptide 4 (46 aa)
MIELVASDQSEGLFSKALCALTYCCTTALEKRIRRKVRKHITYGSF*

Sequence

>CNT30139319
ATATAAATATTCAATTATTTTACCAGCAATTCGAGTTTAACTTACAAGGACATTAAATTAGTTGCACTAGAATGTTTAATTAATTGTAGGTAAAACCTTG
CATCCATAGGTGCATGGAAAGTGCTATGTGGTATCAATAAAAAAGTTTAAAAGACTGTATGGCAGGATCGACCATGTACAGTCTATTTCTGAAGGTTCCT
TGCAAAGTTGTTAGAATGTTTTCCCGATACATTATTAAAGCAAGTTGTTCGAATGCCATGTCAAAAGCAGAGTAAGTACAAGGTCAACGACTTCGACAAC
ACTCGCTGGCCATATAGCATAACCCAGAAGCATTAATTCCACCGTGATCAATGTACTCACCGGGATGTGGGAGTCGCGGGCGTTGCGCTTGGGGTCGGTG
GCGGAGAAGACGGTGTAGACGAGGACGAAGATCATGCCGCCGAAGGCCCAGGCGATGCCGAGGATGCCGACGCCGCTGCAGGCGGCGTCGGTGGTGTTGA
CGGTGGGGTCCGACTGGTGCTTGTAGCCGATGACGGTGGCGACCGTGATGTAGAGGAAGAGGAGCGTGGCGACGAACTCGGCGATCACCGCGCGGTACAG
CGACCACTTGGTGAGCTCCTCGAAGTCGACGATCGGCGCCGGGGGAGGGTCCGAGTAGTCCTTGGCCGAGAACTCGCCCCCCTCGGGTGCCGCCTCAATG
TCCTTCGCCATTGCTAGCTTGATTAACTAGTGCCCTGCCCTGTGAGCTGTGTTTGCTGCAGTTGTGTGTGGTGTGAGGCGATAGGAGAGAGCTCAGGTAT
ATATGGGGAGCCAGAGCGAGCTCATCATCAGCTCGACTTTGGCTTCGTTAAGGGCGGGGCAGATTGATTATTAGTGAGGGATAAGGTTTTGTGCTTAATT
TAGGGGAGATTTTGGTTATAATTTGCCGCCCACAACCGACTATGCCATCATCGATAGGTCATTTCGGAGCCTAATGATCGAACTGGTGGCTAGCGATCAA
TCGGAGGGGCTATTTTCTAAGGCACTATGCGCGCTTACGTACTGTTGTACTACTGCTCTGGAAAAAAGAATACGTAGAAAGGTCAGAAAGCACATCACTT
ATGGCAGCTTCTAATTTAGCTAGCGTGGTCAGTAACTCATCAGCGGTGATGGTATATAGCGACGTTTAGC