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Detailed information on CNT3013766


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671722Zea maysSetaria viridis8.722.3688.8972forward
CNT30520646Zea maysSetaria italica31.450.3993.08260forward

Expression of CNT3013766

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MSGAPAEPLPLADLGAAAWASLSMLPLWRPHSLALASSHHHRPSRSCCPGRTGLVHGSHPMDT*

>peptide 2 (50 aa)
MGLAVRPGNRSTVGKLCSCSSACANGFCSPSARNLATFTPDPASFSASST*

Sequence

>CNT3013766
CAGCGACTTACCCATTCTTATGCCTATATTAAAACTCCACTCTCCAAATAATACAGTTTACAACAGTGCTTTAGATGACCGGTGAACCTTATAGTAGGCA
CTCGCCACTGACTATAAGCACACACAAGTAACCTCTCCCTCAGCTACCAAGCACAGGGCCTCAGAAGCTCAGACTTCAGGTATACATGCTGCAATCATTT
TGCAGTTACAAAAGCTACACCTGATTTTTCCCCCCTGAACCCTCGTTCCTTCCTGTGTCACTACCAAACCCAGTCCCCTCCACCTCCCTTCTCTACGAAC
CTAGATAAACTCATAAAGACCAACATAAGATCATACAGACTGACAGAGAACGATGGTTCTCGCTCACTGGAGGTCGTCTCTCACCGGAGGCTGTTGACGA
AGGCGAGGAGCGAGTCGACGTCCCTCTTCTCCGACGGGTACTTGATGGGCCTGGCGGTGCGGCCCGGGAACAGGAGCACGGTGGGAAAGCTCTGCAGCTG
CAGCTCGGCCTGCGCGAACGGCTTCTGCTCGCCGTCCGCGCGGAACTTGGCCACCTTCACCCCGGACCCCGCCAGCTTCTCGGCCAGCTCCACGTAGGAG
GGACACCACGGCGGGGCTCTCGAAGATGTCCGGGGCGCCCGCCGAGCCGTTGCCGTTGGCGGACCTGGGGGCCGCCGCCTGGGCGTCCTTGTCGATGTTG
CCCTTGTGGAGGCCGCACTCCTTGGCCTTGGCGTCCTCCCACCACCACCGGCCTTCACGCTCGTGCTGCCCCGGCAGGACGGGCCTGGTGCACGGCTCGC
ACCCGATGGACACGTAGCCCTGTGAGAA