CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30520711 | Setaria italica | II:32785905-32797728 (+) | coding (0.132) | - | 86 | 6.74 | 2 | ||
CNT30520710 | Setaria italica | II:8798172-8810009 (+) | noncoding (-0.0004096) | 7e-28 (sp|C0LGH3|Y5614_ARATH) | 47 | 8.37 | 2 | ||
CNT30520709 | Setaria italica | II:349271-349652 (-) | noncoding (-0.0004096) | - | 65 | 8.12 | 1 | Expressed preferentially in leaf | |
CNT30520707 | Setaria italica | II:41604909-41605990 (+) | noncoding (-0.0512) | - | 56 | 8.84 | 2 | Expressed preferentially in leaf | |
CNT30520706 | Setaria italica | II:17430950-17431720 (-) | noncoding (-0.0589824) | 0.00000000002 (sp|Q9LT82|MPC_ARATH) | 60 | 88.15 | 2 | Expressed preferentially in root | |
CNT30520705 | Setaria italica | II:27624327-27644535 (+) | noncoding (-0.0344064) | - | 39 | 37.71 | 2 | ||
CNT30520704 | Setaria italica | II:31165454-31165837 (+) | coding (0.282) | - | 99 | 0.68 | 2 | Expressed preferentially in root | |
CNT30520701 | Setaria italica | II:44125197-44126529 (-) | noncoding (-0.0262144) | 0.000000000000009 (sp|P10707|CB2D_SOLLC) | 92 | 45.72 | 2 | Conserved counterparts: CNT30117266 Expressed preferentially in root |
|
CNT30520700 | Setaria italica | II:24208559-24212664 (-) | noncoding (-0.053248) | - | 81 | 10.37 | 4 | Conserved counterparts: CNT30452605 Expressed preferentially in root |
|
CNT30520698 | Setaria italica | II:22249872-22250929 (+) | noncoding (-0.139264) | - | 43 | 4.81 | 2 | ||
CNT30520697 | Setaria italica | II:20309425-20311620 (+) | coding (0.024) | - | 51 | 3.54 | 2 | ||
CNT30520696 | Setaria italica | II:47026143-47026748 (-) | noncoding (-0.04096) | - | 62 | 0 | 2 | Conserved counterparts: CNT30604408 | |
CNT30520694 | Setaria italica | II:48988867-48989653 (-) | coding (0.212) | - | 86 | 0.61 | 2 | Conserved counterparts: CNT30136604 | |
CNT30520693 | Setaria italica | II:48882753-48883477 (+) | coding (0.209) | 9e-28 (sp|Q9XFB7|NAS9_HORVU) | 83 | 1.32 | 3 | Expressed preferentially in stem | |
CNT30520692 | Setaria italica | II:14954978-14955754 (-) | coding (0.156) | 4e-34 (sp|Q8L5Y5|ZDH17_ARATH) | 91 | 1.1 | 2 | ||
CNT30520689 | Setaria italica | II:35872237-35872472 (+) | noncoding (-0.065536) | - | 64 | 4.68 | 1 | ||
CNT30520687 | Setaria italica | II:43994218-43995015 (+) | noncoding (-0.0516096) | - | 57 | 180.31 | 2 | ||
CNT30520685 | Setaria italica | II:1266943-1267357 (+) | noncoding (-0.159744) | - | 52 | 9.96 | 2 | ||
CNT30520684 | Setaria italica | II:3542793-3545448 (-) | coding (0.283) | - | 70 | 1.99 | 2 | ||
CNT30520683 | Setaria italica | II:2398618-2399791 (-) | coding (0.145) | - | 84 | 12.48 | 2 | Expressed preferentially in root | |
CNT30520682 | Setaria italica | II:43695034-43695423 (+) | noncoding (-0.024576) | 0.0000001 (sp|P82781|DEF03_ARATH) | 90 | 45.53 | 2 | ||
CNT30520681 | Setaria italica | II:759436-760082 (+) | coding (0.156) | - | 73 | 7.3 | 2 | ||
CNT30520678 | Setaria italica | II:28372183-28372815 (-) | coding (0.329) | 0.00000004 (sp|P85955|DRE1_PSEMZ) | 69 | 0.5 | 2 | Conserved counterparts: CNT30117581, CNT30604553, CNT30103362, CNT3013315, CNT30696108 Expressed preferentially in leaf |
|
CNT30520677 | Setaria italica | II:47815943-47816577 (+) | noncoding (-0.0856064) | 5e-34 (sp|Q9SW70|SRP_VITRI) | - | 0.5 | 2 | Conserved counterparts: CNT30131862 Expressed preferentially in root |
|
CNT30520676 | Setaria italica | II:49155508-49157611 (+) | noncoding (-0.012288) | - | 98 | 16.47 | 1 | Expressed preferentially in stem | |
CNT30520674 | Setaria italica | II:30954551-30954996 (-) | noncoding (-0.0479232) | - | 31 | 8.79 | 1 | Expressed preferentially in root | |
CNT30520673 | Setaria italica | II:43994302-43994916 (+) | noncoding (-0.0516096) | - | 57 | 4236.04 | 2 | ||
CNT30520672 | Setaria italica | II:41010366-41010910 (+) | coding (0.334) | - | 68 | 4.44 | 2 | ||
CNT30520671 | Setaria italica | II:41694771-41696164 (+) | coding (0.198) | 3e-115 (sp|P0C1M0|ATPG_MAIZE) | 82 | 253.32 | 3 | Conserved counterparts: CNT30229753, CNT30453464, CNT30577158, CNT30694821 Expressed preferentially in root |
|
CNT30520670 | Setaria italica | II:38500370-38500787 (+) | noncoding (-0.0262144) | - | 52 | 0.89 | 2 | Conserved counterparts: CNT30103485 Expressed preferentially in root |
|
CNT30520669 | Setaria italica | II:39029022-39031170 (+) | coding (0.151) | 3e-29 (sp|B7F8P5|SAU39_ORYSJ) | 77 | 4.04 | 4 | Expressed preferentially in leaf | |
CNT30520668 | Setaria italica | II:43715774-43716180 (+) | noncoding (-0.13353) | 0.000000001 (sp|P00302|STEL_TOXVR) | 92 | 1915.55 | 2 | Conserved counterparts: CNT30450846 Expressed preferentially in leaf |
|
CNT30520666 | Setaria italica | II:44102628-44103138 (-) | noncoding (-0.008192) | - | 55 | 3.98 | 2 | ||
CNT30520664 | Setaria italica | II:4885831-4889118 (+) | noncoding (-0.04096) | - | 71 | 7.66 | 3 | ||
CNT30520662 | Setaria italica | II:3753797-3754274 (-) | coding (0.428) | - | 93 | 1.22 | 2 | Conserved counterparts: CNT30694787 | |
CNT30520660 | Setaria italica | II:6994559-6995188 (-) | noncoding (-0.016384) | - | 81 | 6.92 | 3 | Expressed preferentially in leaf | |
CNT30520659 | Setaria italica | II:26154701-26164564 (+) | noncoding (-0.02048) | - | - | 6.45 | 2 | ||
CNT30520657 | Setaria italica | II:11733551-11734018 (+) | coding (0.212) | - | 58 | 2.37 | 2 | ||
CNT30520655 | Setaria italica | II:48623049-48623812 (-) | noncoding (-0.0475136) | 1e-45 (sp|Q6Z4N6|40G2_ORYSJ) | 82 | 0.46 | 2 | Conserved counterparts: CNT30453828, CNT30576982, CNT30596646, CNT30117190, CNT30102506 | |
CNT30520653 | Setaria italica | II:36319388-36319757 (+) | noncoding (-0.0622592) | - | 64 | 9.15 | 2 | ||
CNT30520652 | Setaria italica | II:13906201-13908732 (+) | coding (0.323) | 5e-82 (sp|Q84RL7|PIP21_MAIZE) | 87 | 1.63 | 3 | Conserved counterparts: CNT30139319, CNT3012516 Expressed preferentially in root |
|
CNT30520649 | Setaria italica | II:33551718-33552832 (+) | coding (0.307) | 1e-78 (sp|I4DST8|TCEA1_TULGE) | 45 | 0.31 | 2 | Conserved counterparts: CNT30450039, CNT30577689 | |
CNT30520648 | Setaria italica | II:3200898-3207777 (+) | coding (0.422) | - | 99 | 0.75 | 2 | ||
CNT30520646 | Setaria italica | II:41488687-41489397 (+) | coding (0.238) | 1e-71 (sp|Q6Z4A7|APR1_ORYSJ) | 58 | 948.31 | 2 | Conserved counterparts: CNT3013766 | |
CNT30520644 | Setaria italica | II:19109717-19111704 (-) | noncoding (-0.0421888) | - | 79 | 4.61 | 2 | Expressed preferentially in leaf | |
CNT30520643 | Setaria italica | II:24984928-24985747 (+) | noncoding (-0.014336) | - | 77 | 3.37 | 2 | Expressed preferentially in root | |
CNT30520641 | Setaria italica | II:41971003-41971375 (-) | coding (0.303) | - | 96 | 7.41 | 2 | ||
CNT30520638 | Setaria italica | II:26660576-26665142 (-) | noncoding (-0.0397312) | - | 53 | 25.42 | 4 | Expressed preferentially in leaf | |
CNT30520636 | Setaria italica | II:43195882-43197123 (+) | coding (0.176) | 0.000000001 (sp|Q9SDM1|CB121_HORVU) | 57 | 0 | 3 | Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596639, CNT30604335, CNT30102749, CNT3013737, CNT30694831, CNT30708123 Expressed preferentially in root |
|
CNT30520633 | Setaria italica | II:45643282-45643749 (-) | coding (0.043) | - | 79 | 8.47 | 2 |