« Back to Oryza barthii search


Detailed information on CNT30577158


BLAST search results

BLAST vs Swiss-Prot:
sp|P0C1M0|ATPG_MAIZE, E-value = 4e-132

BLAST vs NONCODE: nothing found

Expression of CNT30577158

Peptides detected in this lncRNA

>peptide 1 (64 aa)
ELKSCVSRAINNYIDRVGSIFFPFFFRAITEITDTIAREKKEVKKNRVVYITAATSAAQARWMG*

>peptide 2 (86 aa)
MRLRSSRSEHRTTCRRPLLPLLGAERRRVARAEEDQAVERCEHDMAGGSPATAAAAAAAGGGKDFGLGLGGGEARRGEGPRLSRRK*

>peptide 3 (40 aa)
MERFFRSSMALSVALLMALILAASSLASDSWSARRIWLLR*

Sequence

>CNT30577158
TGAATTGAAATCTTGTGTATCTCGCGCGATTAACAATTACATCGATCGAGTCGGATCGATCTTTTTTCCTTTTTTTTTTCGTGCTATCACAGAAATTACA
GACACAATAGCAAGAGAGAAAAAGGAAGTCAAAAAGAATAGAGTAGTATATATAACAGCAGCAACCTCAGCAGCTCAAGCGAGGTGGATGGGATGAAGAA
ATGAGTTGATTGGATTTAGGCGAGGGCGTCGGCGCCGGCGACGATCTCGAGGATCTCGCCGGTGATCTTGGCCTGGCGCTGGCGGTTGTAGACCATGGAG
AGGTTCTTCCGGAGCTCGATGGCGTTGTCGGTGGCGCTGCTCATGGCGCTCATCCTGGCGGCGAGCTCGCTGGCGAGCGACTCCTGGAGCGCGCGGAGGA
TCTGGCTGTTGAGGTAGAGCGGGAGGAGCGCGTCGAGGATCTGGACGGGGTCCTGCTCGAACTGCACCACGGGTGAGAAGGGCTGCCTCGTCCTCGGTGG
CGTCCACGCACACGCCGTTGATGTCGCAGATCTCCCCCTTGGGCGACATGGGGAGCAGCGTCTGGATGATGGGGTCGGAGCGGACGAGGGAGACGAACTT
GGAGTAGAGGAGCTCCACCTTGTCCACCGCCTCGGACACGAACAGCGAGTAGACGAGGTCGCAGATGGACTGGGAGTCCTTCACGGTGGGGATGCCGTTC
ACCTCCAGCGTCCGCTCGGTGGGGATGAAGGGGCGGCGGATGAAGTAGGCGTTGCCCTTCTTGCCGACGCTGACGACGGTGTACTCGAGGACGTTGTTGT
TGAAGCTGCCGCAGAGGCCGCGCTCGCCGGTGAGGACGACGAGGGCGACCTTCTTGACGGGGCGGATGCGGGTGAGGGGGAGATCGATGTCCTCCGTCTG
GATCTCCTGGTTCATGTTGTAGAGCACCTCCACCAACGCCTCCGAGAAGGGGCGGGAGGACACCACCGCCTCCTGCGCCCGCCGCACCTTGGCCGCCGCC
ACCAGCTTCATCGCCTCCGTGATCTTCTGCGTGTTGCGCACCGAGTCGATGCGGCTCCGCAGCTCACGCAGCGAGCACCGCACCACCTGCAGGCGGCCGC
TGCTGCCGCTGCTAGGAGCGGAGCGGCGGCGGGTGGCCAGGGCGGAGGAGGACCAGGCGGTGGAGAGGTGCGAGCACGACATGGCTGGCGGGTCACCGGC
AACAGCGGCGGCGGCGGCGGCGGCGGGTGGAGGGAAAGATTTCGGATTGGGTTTGGGTGGAGGTGAGGCGAGGCGAGGCGAGGGGCCGAGGCTCTCCAGG
CGGAAGTAGGGCAGGTGGGGTTTTCAAGGCGGGGTGAGTGGTGGAGGAGGCAGTGGTCGGATCATGTGGATGGATGTGCTGCTGCTTCTGCTGCTTCCAT
TTCACTCGAATC