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Detailed information on CNT3057361


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70Y03|PSAA_AMBTC, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Amborella trichopodaOryza sativa32.6429.5185.081642forward
CNT30675574Amborella trichopodaSetaria viridis3.2470.2688.34163forward
CNT30535090Amborella trichopodaEucalyptus grandis4.2722.4284.65215reverse complement
CNT30549732Amborella trichopodaIpomoea triloba3.5848.2685.56180reverse complement
CNT30730408Amborella trichopodaCorchorus capsularis5.9663.4288.67300forward
CNT30526549Amborella trichopodaPhaseolus vulgaris13.199.8582.85659forward
CNT30632355Amborella trichopodaVigna unguiculata6.3236.6488.68318forward
CNT30201935Amborella trichopodaPisum sativum31.2592.2586.91572forward
CNT3047566Amborella trichopodaPrunus dulcis17.8946.6683.67900forward
CNT3094383Amborella trichopodaSolanum tuberosum2.1149.387.74106reverse complement
CNT30194121Amborella trichopodaSecale cereale6.3435.6490.6319forward
CNT30588877Amborella trichopodaMusa acuminata2.546.1594.44126reverse complement
CNT30511784Amborella trichopodaSolanum lycopersicum5.4541.788.32274forward
CNT30555988Amborella trichopodaOryza glaberrima7.2254.0281.54363forward
CNT30171250Amborella trichopodaTrifolium pratense2.0127.6789.11101forward
CNT30245953Amborella trichopodaAvena sativa1.7533.0888.6488reverse complement
CNT30598583Amborella trichopodaFraxinus excelsior4.1921.1880.57211forward
CNT30446760Amborella trichopodaSaccharum spontaneum4.6720.8191.06235forward
CNT301761Amborella trichopodaZea mays32.829.1185.521650forward
CNT30606803Amborella trichopodaGossypium raimondii2.9452.386.49148forward
CNT30232528Amborella trichopodaAnanas comosus18.0345.8386.55907forward
CNT30217417Amborella trichopodaKalanchoe fedtschenkoi4.3747.0190.45220forward
CNT30214788Amborella trichopodaHelianthus annuus2.8645.1489.58144forward
CNT30713469Amborella trichopodaMalus domestica golden8.949087.78450forward
CNT30627902Amborella trichopodaDaucus carota10.5559.5388.89531forward
CNT30688863Amborella trichopodaTriticum urartu33.6580.585.061693forward
CNT30351181Amborella trichopodaEragrostis tef2.6826.7385.19135forward
CNT30367191Amborella trichopodaSorghum bicolor5.2910082.33266forward
CNT30621618Amborella trichopodaCajanus cajan8.5990.3887.27432forward
CNT30595862Amborella trichopodaOryza meridionalis14.8968.485.58749forward
CNT30369168Amborella trichopodaOryza glumipatula3.8653.1589.69194forward
CNT3022800Amborella trichopodaPopulus trichocarpa4.4165.2989.64222forward
CNT30332506Amborella trichopodaDioscorea rotundata6.3835.2489.41321forward
CNT30147758Amborella trichopodaBrachypodium distachyon6.737.5783.98337forward
CNT30103542Amborella trichopodaOryza rufipogon4.6132.7291.81232forward
CNT30497263Amborella trichopodaDigitaria exilis7.0850.581.46356forward
CNT30115505Amborella trichopodaOryza nivara4.4552.5887.05224forward
CNT30604206Amborella trichopodaOryza punctata3.8648.7487.11194forward
CNT30550879Amborella trichopodaOryza brachyantha1.7521.9587.588reverse complement
CNT30333024Amborella trichopodaCynara cardunculus19.897.7487.55996forward

Expression of CNT3057361

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLSVACVDKSYIIECITLIIGINFWSRSFIIIL*

>peptide 2 (33 aa)
MVIRVSKVRTRWMFVVPTNLVSPNPNRANQRKG*

>peptide 3 (39 aa)
MYECLDRSISYITWNILLYYKLQDHSLVIILIRDILISL*

>peptide 4 (31 aa)
MNNSSVGPIHVTSYQENNCNSQMMVCNIGQP*

>peptide 5 (29 aa)
MNLYEPLKSLLGHEQFLSWSYTCDQLSRK*

>peptide 6 (53 aa)
MLFISRCSASSPMSPIGTSTVGLTCNREPIGVTFRSILESTIEASEAASIVDT*

>peptide 7 (50 aa)
MWCTKKSAVPSGIGNKATFPPTATKSPPPQVKLVLFVAPGPKPFAPGKKE*

>peptide 8 (61 aa)
MFSSVGISGSITSLRTVLESFLPHTAQQSTLLVFRLNLLYLTEIDFSKSIPFFGNHKRLIT*

>peptide 9 (46 aa)
MATSPNNFFVLNAPYFQELDTSTIFDGYTSIQSTNEMDVCCPNQSC*

>peptide 10 (46 aa)
MLAKSENNQRLFVFLENLHLHHHSGFLDLAKPRKYIPLNQRKMMDS*

>peptide 11 (42 aa)
MCKVSSRDMSYHPLIAYTTPNIRLHILTEMEYYCRNLIVHPE*

>peptide 12 (43 aa)
MICNKILATIEEVLSIKLPFIRDLGIFSNPLYFIILLISPQGN*

>peptide 13 (41 aa)
MEHITLLQITRSFISHYINKRHPDIPLIHLKVSFINFISNW*

>peptide 14 (36 aa)
MIPSGYLTYSPSFRSVTRETKTQICFIRYQTGATSK*

>peptide 15 (37 aa)
MIEGIVLSTNFTFTKRGFLSKKNFFPSGISRKDGSGN*

>peptide 16 (35 aa)
MRFSISYGSSPSVHSNKRNNLGNKKKLKYSQFIIN*

>peptide 17 (35 aa)
MKRPAKSQVISEPLRDSMFVLFFPISHLSIFLSYS*

Sequence

>CNT3057361
TAAACTGAAGGCCCAAACAAAATTAGCACCTAGGAAAAAAATTCCATATGCGGATAATGAAGAACCATAATATTGGATCACCTGAGAGGCTTGTGCCCAT
AGAAAATCCCGGAGCCATCTGTTAATAGTAATGGAACTATGTGCAAAGTTTCCTCCCGTGATATGAGTTACCACCCCTTGATTGCTTATACTACCCCAAA
CATCCGACTGCATATTCTAACTGAAATGGAATATTACTGTCGAAATCTCATTGTACATCCAGAATAGACCTAAGAAGACATGATTCCAAGCGGATACTTG
ACATATTCCCCCTCTTTCAGGTCCGTCACAAGGGAAACGAAAACACAGATTTGCTTTATCAGGTATCAAACGGGAGCTACGAGCAAATAGAACGCCTCTC
AGTAGTATCACTACGGTCACATGGATCAGAAATGCATGAATGTGGTGTACCAAAAAATCTGCAGTTCCTAGTGGAATAGGTAACAAAGCTACTTTTCCAC
CTACTGCTACTAAATCACCACCTCCCCAAGTCAAACTGGTGCTTTTTGTTGCACCAGGACCAAAGCCTTTTGCACCAGGTAAGAAAGAATGAGTGTTTTA
TATCCATTGAGCAAAGATGGGTTGTAATTGTATAGCGGTATCTGAAGACATATCTTGAGGACACCCCAAAGCGCTCATGGTATCATTATGAATATACAGG
CCAAAACTATGAAAGCCTAGAAATTTACATGCCCAATTGAGGTATGATATGATTGCATCACGGTGCCTAAGGACACGATCTAAAAGGTTGTTGTATCGAG
TAGTTGGGTCATAGACTCTTACCATAAAAATAGCTGCATGTGCAGCAACGTCAACTATGAGAAATCCACCAATCCACATGTGATGTGTGAACAACGAGAG
TTGTGTACCATGGTCAATAGCTAGGTATGGATAGGAGGGCATAGAATACATATGGTGAGATACAACAATGGTTAAAGAGCCTAACATAGCTCGGTTAAGA
GCTAATTGAGCACGCCATGACGTTGTTAGGATCTCATATAAGCCTTTATGACCCTCACCTATAAATGAACCTTTATGAGCCTCTAAAATCTCTTTTAGGC
CATGAACAATTCCTCAGTTGGTCCTATACATGTGACCAGCTATCAAGAAAATAATTGCAATAGCCAAATGATGGTGTGCAATATCGGTCAGCCATAGACC
CCCTTTTACTGGATCTAATCCTCCACAAAAAGTAAGAAATTCCGCATAGTTTGACCAATTCGAGGTAAAAATGGGGTTGTTCCCTAGGCAAAACTGGGAT
AAAGTTGAGCCAAAATATCCCGATTCAAGATAAATTCATGAGGACGTGCTAGCTCTTTAGGATCCACTCTAGTGTCTAAAAATTGGTTAATGGGTAAAAG
ATACATGTACTTAGTGTCCCGCCCAAGAAAGAGACCCAAGTCCTAGTAACCCTGCTAAGTGGTGGTTCAATATGGATTCTACATCTTGGAACCAATCCAA
CTTTGGAGCAGCCTTGTGATAATGGAACCAACCTGCAAAAAGCATTAACGCTGCCAAGACCAAAGCACCAATTGCGGTACAATAGAGTTGTAATTCACAA
GTTATTCTAGATGCTCGCCAAATCTGAAAATAACCAGAGGTTATTTGTATTCCTCGAAAACCTCCACCTACATCACCATTCAGGATTTCTTGACTTGGCC
AAACCACGGAAGTACATACCACTCAACCAAAGAAAGATGATGGATAGTTGATCGAAATGAGCACTAAATACTTTTCGAGAGATTTCCTCCAAGTCACTGG
TATGGCCATCAAAATCGTGTGCATCAACATGTAGGTTCCAGATCCAAGTGGTAGTGTTGGGGCCTTTAGCTATTGTCCTTGAGAAATGGCCGGGTCTGGC
CCATTCCTTGAAAGAAGTTTTTACAGGATCCCTATCCACCATAATCTTAACTTATGATTTCGACGAATGAATAATCATTGACAACACATATGAATAATCA
TTGACAACACATATGAATAATCATTGACAACACATATGAAGAGACCCGCCAAGAGTCAAGTAATTAGTGAACCTTTGAGAGATAGTATGTTTGTTCTTTT
CTTTCCTATCTCTCATCTATCTATTTTCCTTAGTTATTCTTAGTTATTCACTAGAGCAATTATTACATGGAAGTCAATCAGCGGCAAGTGTTCAGATCTA
TTATGACATATCTATTAGGTGCTCAACGGACCATTCTAATTTTTTAAAATCTATTCCCAGCATGACACAAAATTGTTTTTTATTTTGGTCCAACCTAATT
TATTCGTATATTTATGTATGAGTGCCTAGATAGATCTATCTCATATATTACATGGAACATATTACTCTATTACAAATTACAAGATCATTCATTAGTCATT
ATATTAATAAGAGACATCCTGATATCCCTTTAATACATTTGAAGGTCTCTTTTATTAACTTTATTAGCAATTGGTAGTATAAAGTAATATTTTTTTTATA
GTTATCGTCTATCCTTATGAGGTACCATACAAAATGGAACCATCTTAGAAGGGATATAATGAAATAGAAGGGATATAATAAAATTCTTTAATTCATTCTT
CCGATAAGGATCGATTTGATGGATCCAACAAACAATGAAAATCAATTCATAAAGAGAGTGTTCTTATTCGAAGCGCCTCGTGATCTTTAACCAATTCTGT
GTTTTAACATAATTACCTGGAGTAAGTGCTATAGCTTGTTTTCAATACTCAGCTGCTTGATCGGACCAAGTCTCTGCGATTTCAGAATCTCCCTATCGAA
TGGCATGTTCTCCTCGGTCGGGATAAGTGGATCAATTACTTCCCTTAGAACCGTACTTGAGAGTTTCCTACCTCATACGGCTCAACAATCAACTCTTTTG
GTGTTCCGTCTTAATCTATTATATCTAACTGAAATAGATTTCTCGAAATCCATCCCATTTTTTGGAAACCATAAGAGGTTAATTACATGATTTTCAAACT
CAAATTTCCATCAATCAAATAATCAGTTTTATCTCTTCTTCCACCTTCAGAAGAATGAAGCTGAAGCATAGATATCTCCAGCTCCCCCTATCGTTAGAAT
TTTCTGAAAGGTAACTATCTCATTTTCGTTTGTATAGAAATTCATATAGAATCTTTGAAAAATACCTTTCTCGATAATAAAGGACTTACTATCTTTGGAA
TCTGATGCTATACTGCTACTCAGCACCTTAGTGGATCAACTCTATTACATAAGTTGATTCCTAACTTTATATCTCATATCTTGACATAAGTAAGCAGGTC
TTATTGTATGGGCCCAAAACCTCAATCATTGATCTTTACGGTGCTTCCTCTATCAATTAGATCTTTTATCTGTAGAAATTAGTACATAGGCCATATCCAT
TTCTTCATATCCTGACTCCTATGAAGTCTCTTTCTTTGCTACAGCTTATAAAATCGTTCCTTTGCACGATGTATATGTAGAAGGCCTTTTTTGTTTTCTT
TTGTTTGTTTCTCCTTCTAGTATTTACTAGCCGATTTTCTCTTTCTTTCTTTCTTTACTTTTTTATTATTATTATTTTTCTTATTCTTTATTATTCTTTA
TTATTCTTTATTATTATTATTCTATTTTCTTTCTATTCTTCTTTCTATTCTATAGTAGAGATAGTCTCACGTAATGACAGATCACGGCCATATTATTAGA
AGCTTGTGGTAAGAATGGATTTCGTTCTAGTGCCCGAAAATAATATTCCAAAGCCTTCGTATGCTCTCCGTTGCTTGTGTGGATAAGTCCTATATTATAG
AGTGTATAACTTTGATCATAGGGATCAATTTCTGGTCTCGTAGCTTCATAATAATTTTGTAAAGCTTTCGCATAATTTCCTTCAGAATGAGCTGACATTC
GTTACGGTCGTTCATTCCATTCAAAGGATCTCCGTTCCAGAACCGTACATGAGATTTTCCATCTCATATGGCTCCTCCCCTTCTGTGCATAGTAATAAGA
GGAATAATCTAGGGAATAAAAAAAAATTAAAATATTCTCAATTTATTATAAACTGACAGGGGCTGGTGTTTTTACAAGAAATCTCTAGCCAGCCTTCTTG
CAAGAGGCCCTTTCTGAATTTTTTAATACCAAGCGTCTTAGTCCTAGATAAAAATGGCAACTTCCCCCAACAATTTCTTTGTCCTCAACGCTCCATATTT
CCAGGAATTAGACACTTCAACGATCTTTGATGGTTATACGAGTATCCAAAGTACGAACGAGATGGATGTTTGTTGTCCCAACCAATCTTGTTAGTCCCAA
TCCCAATAGAGCAAATCAAAGAAAGGGATAATTTATAACAAAGTTTTTATGTTGTTCATTTCTAGGTGTAGTGCTTCTTCCCCTATGTCACCTATTGGTA
CTAGTACAGTAGGATTGACCTGCAATAGAGAACCTATAGGTGTAACCTTTCGCTCAATACTAGAATCAACAATTGAAGCATCTGAGGCTGCATCAATCGT
GGATACATGATAGAAGGTATTGTTCTATCTACGAACTTCACCTTCACCAAGCGTGGGTTTCTTTCAAAAAAAAATTTCTTTCCATCCGGAATTTCTCGTA
AGGATGGGAGTGGTAATTAAAAAAAAAATCAAATCGCACCATCTCCATAATAGGTAAATGCCTCTTTTCTCCTGAAGTCGTCAGAATGATTTGTAATAAG
ATATTGGCTACAATTGAAGAGGTCTTATCGATAAAATTGCCATTTATCCGAGATTTAGGCATATTTAGCAATCCACTTTACTTTATAATTCTTCTCATTT
CCCCTCAAGGAAACTGATCCTACAAATAAACGAATTTCTCAGTACAAAATGACATGACATCAAAACAAACAAATTTTTAAATAAAACAAAACAAAAAAGG
TGGACCTTTCACTCAAATGGGTCCTTTTGAACATGGATAGATAGGAAATCTTCGACTCATATTGGATTGAAATTCAATATTCAAATTGAACAATATTCAA
ATTTCATTCAATCAAATTGAGTAGTATATCA