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Detailed information on CNT30598583


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M3M5|YCF3_SPIOL, E-value = 4e-55

BLAST vs NONCODE:
NONCQUT003887, E-value = 2e-38

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Fraxinus excelsiorOryza sativa25.24.5190.84251forward
CNT30618958Fraxinus excelsiorSesamum indicum28.925.1797.57288forward
CNT3020650Fraxinus excelsiorCitrullus lanatus27.3115.6388.6272forward
CNT30730408Fraxinus excelsiorCorchorus capsularis27.1157.0889.26270forward
CNT30632297Fraxinus excelsiorVigna unguiculata27.1115.2790270forward
CNT30201080Fraxinus excelsiorPisum sativum27.1113.5691.85270forward
CNT30485948Fraxinus excelsiorOlea europaea13.9623.6887.77139reverse complement
CNT30194121Fraxinus excelsiorSecale cereale25.228.0486.06251forward
CNT30589320Fraxinus excelsiorMusa acuminata10.9422.4389.91109forward
CNT30510815Fraxinus excelsiorSolanum lycopersicum11.1423.2792.79111forward
CNT30556045Fraxinus excelsiorOryza glaberrima25.27.6990.84251forward
CNT30445979Fraxinus excelsiorSaccharum spontaneum25.263.8786.45251forward
CNT3017916Fraxinus excelsiorZea mays25.212.1786.06251forward
CNT30232528Fraxinus excelsiorAnanas comosus27.3113.7487.5272forward
CNT30217417Fraxinus excelsiorKalanchoe fedtschenkoi27.1157.6994.81270forward
CNT30655373Fraxinus excelsiorRosa chinensis31.127.486.77310forward
CNT30627898Fraxinus excelsiorDaucus carota28.219.1389.68281forward
CNT30595954Fraxinus excelsiorOryza meridionalis23.6917.9791.1236forward
CNT30359977Fraxinus excelsiorLactuca sativa39.9622.386.93398forward
CNT30430934Fraxinus excelsiorPapaver somniferum27.114.1391.85270forward
CNT3057361Fraxinus excelsiorAmborella trichopoda21.184.1980.57211forward
CNT3022800Fraxinus excelsiorPopulus trichocarpa24.672.0686.53245forward
CNT30332506Fraxinus excelsiorDioscorea rotundata26.9129.4288.06268forward
CNT30149145Fraxinus excelsiorBrachypodium distachyon25.213.9885.66251forward
CNT30103542Fraxinus excelsiorOryza rufipogon25.235.486.45251forward
CNT30114189Fraxinus excelsiorFicus carica27.116.8591.85270forward

Expression of CNT30598583

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MCFNIITRSKGYSLFPILSCLIKPSLRNFRISLANGLFSPVGIDHGHIIKSLG*

>peptide 2 (41 aa)
SSSFRTTHTKRPANSQIISKPLRDISIISLFLFYLPFIYFL*

Sequence

>CNT30598583
GTCCTCCTCTTTCCGGACAACACATACAAAGAGACCCGCCAACAGTCAAATAATTAGTAAACCTTTGAGAGATATTTCTATAATTAGTTTGTTTCTCTTC
TATCTCCCATTTATCTATTTTCTTTAGTTATTCACTAGAGCAATTAGGATCTGGAAGTCGATCCGGGGCAAGTGTTCGGATCTATTATGACATAGCCATG
AGGCGCTCAACGGACCTTTTTTATCTTATAAAACCTTTTTGTAGCTTTGGATTGATGCAAAAACTACTTTTTTGTACAACCTAGTGTAGATTCATATCTC
AATTAGAAGGTCTTAGATAGAGCTGCTTTATCTTTTCCATAGATGATATGAATTACTCTATTCCAAATCACGCGAGCAGCCATTACTAAGAGACATCCCG
GTATATATATTTAATTTAGTTGTTAATTTAGATTTAAATTTAGGTTTTTAAAAAAGAATTCGTTTTCTAAAATTTGGAATAAAAAAAAAAGTAAAGAAGT
CTATTTTTGACTCTATCCCTTTTTTATCCCTACGAAATATCAGATGAAATAGAACGCTTAGAAGGGATATAATGAAATTCTTTGATTGGCTCTTCCCAAA
GCAAAGGAATTATCCATTTTTTTATTTGACTGATGGGGCCAACAAACAATAAATTCTAACAAATATATATATAAATAATAGAATAGAATTAATAAACTAA
ATAAACGGTAAACGGCGTCTTCTTTTATTCGAAACGCCCCGTGATCTTCAACCAATTATGTGCTTCAATATAATTACCAGGAGTAAGGGCTATAGCCTGT
TTCCAATACTCAGCTGCTTGATCAAACCAAGCCTCCGCAATTTCAGAATCTCCCTGGCGAATGGCCTGTTCTCCCCGGTCGGAATAGATCACGGCCATAT
TATTAAAAGCTTGGGGTAAGAATGGGTTTCGTTCTAGTGCTCGAAAATAATATTCCAAAGCTTTCGTATGTTCTCCATTACTTGTATGGATAAGAC