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Detailed information on CNT30201935


BLAST search results

BLAST vs Swiss-Prot:
sp|P58310|PSAA_LOTJA, E-value = 0.0

BLAST vs NONCODE:
NONVVIT000008, E-value = 3e-121

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Pisum sativumOryza sativa100.0630.6487.921705forward
CNT30526549Pisum sativumPhaseolus vulgaris38.7310089.7660forward
CNT301761Pisum sativumZea mays100.0630.0887.861705forward
CNT30713469Pisum sativumMalus domestica golden28.496.892.56484forward
CNT30627902Pisum sativumDaucus carota31.0459.392.82529forward
CNT30688863Pisum sativumTriticum urartu95.0176.9988.081619forward
CNT30362291Pisum sativumSorghum bicolor12.3853.1587.68211forward
CNT30621618Pisum sativumCajanus cajan27.5898.3393.62470forward
CNT30595862Pisum sativumOryza meridionalis49.8277.5387.99849forward
CNT30430934Pisum sativumPapaver somniferum100.0626.190.51705forward
CNT3057361Pisum sativumAmborella trichopoda92.2531.2586.91572forward
CNT30497263Pisum sativumDigitaria exilis21.2451.3584.81362forward
CNT30333024Pisum sativumCynara cardunculus59.4599.4191.311013forward

Expression of CNT30201935

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MIPSGYLACPPSSRATTREPKTKICFIRYQS*

>peptide 2 (42 aa)
MSPLFQGHHKGTENQDLLYPVSIVSYEQIEHLLGVSIPSHEL*

>peptide 3 (29 aa)
MVIQHGFYILKPNQFWSSFVIMKPTSKKH*

>peptide 4 (37 aa)
MLAKSEKNQRLFVFRGNLPLHHHSIFLGLLLAKPLGH*

Sequence

>CNT30201935
TGGGATGCCTGCGCCCATAAGAAATCGCGAAGCCACCCATTAATGGTAATCGAACTCTGCGCAAAGTTTCCTCCTGTGATATGAGTTACTACTCCTTGAT
CATTTATACTTCCCAAAACATCTGACTGCATTTTCCAACTGAAATGGAATATTACTACAGAAATTGCATTGTACATCCAAAATAATCCTAGGAAGACATG
ATCCCAAGCGGATACTTGGCATGTCCCCCCTCTTCCAGGGCCACCACAAGGGAACCGAAAACCAAGATTTGCTTTATCCGGTATCAATCGTGAGCTACGA
GCAAATAGAACACCTTTTAGGAGTATCAATACCGTCACATGAATTGTAAATGCATGAATATGATGTACCCAAAAATCTGCAGTTCCTAATGGAATAGGTA
ACAAAGCTACTTTGCCGCCCACTGACACTAAATCACCACCGCCCCAAGTCAAACTGGTGCTTGTTGTTGCACCAGGGGCTGTTGTGCCAGGTGCTAAAGC
ATGGGTATTTTGTATCCATTGAGCAAAGACAGGTTGTAATTGTATAGCGGTATCTGAAAACATATCTTGAGGGCGCCCTAAAGCACTCATGGTATCATTA
TGAATATACAACCCAAAACTGTGAAAGCCTAAAATATACACACCCAGTTGAGATGTGATATGATTGCATCACGATGTCTAAGAACACGATCTAATAGATC
GTTGTATCGAGTAGTTGGATCATAGTCTCTTACCATAAAAATGGCTGCATGTGCAGCAGCGCCAACTATGAGAAAGCCCCCAATCCACATGTGATGTGTG
AACAATGACAGTTGTGTACCATAGTCAGTAGCTAGGTATGGATAAGGAGGCATAGCATACATATGGTGAGCTACAATAATGGTCAAAGAACCTAACATAG
CTAGGTTAATAGATAATTGAGCATGCCATGACGTTGTTAGGATCTCATATAGACCTTTATGACCCTGGCCTGTAAATGGACCTTTATGGGCTTCTAAAAT
ATCTTTTATACCATGACCAACACCCCAGTTAGTTCTATACATATGACCCGCAATGAGAAAAAGAATTGCAATAGCTAAATGATGATGTGCAATATCAGTC
AGCCATAGACCACCAGTTAGTGGGTCTAATCCTCCACGAAAAGTAAGAAAGTCCGCGTATTTTGACCAATTCAAGGTAAAAAATGGGGTTGCTCCCTCAG
CAAAACTTGGATAAAGTTGAGCCAAAAGATCCCGATTCAAGATAAATTCATGAGGAAGTGGGATCTCTTTGGGATCTACTCCAGCATTTAGAAATTGGTT
AATTGGTAAAGATACATGTACTTGATGCCCCGCCCAAGAAAGAGACCCAAGTCCTAGTAGACCTGCCAAATGGTGATTCAACATGGATTCTACATCTTGA
AACCAAACCAATTTTGGAGCAGCTTTGTGATAATGAAACCAACCAGCAAAAAGCATTAAGGCTGCAAAGACCAACGCACCGATTGCAGTACAATAGAGTT
GTAATTCACTAGTTATTCCAGATGCTCGCCAAATCTGAAAAAAACCAGAGGTTATTTGTATTCCGCGGAAACCTCCCCCTACATCACCATTCAATATTTC
TTGGCCTACTATTGGCCAAACCACTTGGGCACTAGGTCGAATGTGAGTAGGATCATTTAGCCATGCTTCATAATTGGAAAAACGAGCACCATGGAAATAC
ATGC