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Detailed information on CNT3094383

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696451	Solanum tuberosum	Oryza sativa	53.95	2.08	89.66	116	reverse complement
CNT30529029	Solanum tuberosum	Eucalyptus grandis	100	10.5	86.05	215	reverse complement
CNT30618959	Solanum tuberosum	Sesamum indicum	100	3.41	86.51	215	reverse complement
CNT3020650	Solanum tuberosum	Citrullus lanatus	53.49	6.61	89.57	115	reverse complement
CNT30730408	Solanum tuberosum	Corchorus capsularis	41.4	18.82	94.38	89	reverse complement
CNT30632355	Solanum tuberosum	Vigna unguiculata	100	24.77	82.79	215	reverse complement
CNT30201080	Solanum tuberosum	Pisum sativum	98.6	10.65	83.96	212	reverse complement
CNT3047566	Solanum tuberosum	Prunus dulcis	100	11.15	86.05	215	reverse complement
CNT30170457	Solanum tuberosum	Pistacia vera	55.35	9.37	82.35	119	reverse complement
CNT30194121	Solanum tuberosum	Secale cereale	54.88	13.18	89.83	118	reverse complement
CNT30390237	Solanum tuberosum	Triticum turgidum	54.88	5.46	88.98	118	reverse complement
CNT30237795	Solanum tuberosum	Brassica oleracea	59.53	3.34	86.72	128	reverse complement
CNT30556045	Solanum tuberosum	Oryza glaberrima	53.95	3.55	89.66	116	reverse complement
CNT3017916	Solanum tuberosum	Zea mays	49.77	5.19	89.72	107	reverse complement
CNT30232528	Solanum tuberosum	Ananas comosus	53.95	5.86	88.79	116	reverse complement
CNT30655373	Solanum tuberosum	Rosa chinensis	100	5.13	87.44	215	reverse complement
CNT30627898	Solanum tuberosum	Daucus carota	100	6.99	88.37	215	reverse complement
CNT30595954	Solanum tuberosum	Oryza meridionalis	53.95	8.83	89.66	116	reverse complement
CNT30430934	Solanum tuberosum	Papaver somniferum	55.81	1.84	90	120	reverse complement
CNT3057361	Solanum tuberosum	Amborella trichopoda	49.3	2.11	87.74	106	reverse complement
CNT30332506	Solanum tuberosum	Dioscorea rotundata	53.95	12.73	86.21	116	reverse complement
CNT30149145	Solanum tuberosum	Brachypodium distachyon	53.95	6.46	89.66	116	reverse complement
CNT30114189	Solanum tuberosum	Ficus carica	100	5.46	86.98	215	reverse complement

Expression of CNT3094383

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MHIREEPYEVKISRTVLERRFFQLNEDRNGCRLNPKEI

Sequence

>CNT3094383
GGTTGGCTAGAGATTTCTTGTAATAACACTAGCCCTGCTGAGTTCATAATGAGAATATTTTCATCGTTGAATCTTTTTTGATTCTATGTATTATTCTCAT
TATGCACATAAGGGAGGAGCCATATGAGGTGAAAATCTCACGTACGGTTTTGGAACGGAGATTCTTTCAATTGAATGAAGACCGTAACGGATGTCGGCTC
AATCCAAAGGAAATT