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Detailed information on CNT30526549


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GG97|PSAA_PHAVU, E-value = 7e-141

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Phaseolus vulgarisOryza sativa10011.8685.91660forward
CNT30201935Phaseolus vulgarisPisum sativum10038.7389.7660forward
CNT30224362Phaseolus vulgarisHordeum vulgare98.9441.1284.69653forward
CNT301761Phaseolus vulgarisZea mays99.3911.5785.52656forward
CNT30713469Phaseolus vulgarisMalus domestica golden31.064192.2205forward
CNT30627902Phaseolus vulgarisDaucus carota47.4235.0987.86313forward
CNT30688863Phaseolus vulgarisTriticum urartu10031.3884.85660forward
CNT30362291Phaseolus vulgarisSorghum bicolor24.0940.0587.42159forward
CNT30430934Phaseolus vulgarisPapaver somniferum10010.187.12660forward
CNT3057361Phaseolus vulgarisAmborella trichopoda99.8513.182.85659forward
CNT30147977Phaseolus vulgarisBrachypodium distachyon48.9426.3785.14323forward
CNT30585620Phaseolus vulgarisEchinochloa crusgalli99.3912.7984.3656forward
CNT30497263Phaseolus vulgarisDigitaria exilis52.5849.2283.29347forward
CNT30115505Phaseolus vulgarisOryza nivara30.9147.8988.73204forward
CNT30333024Phaseolus vulgarisCynara cardunculus32.1220.888.68212forward

Expression of CNT30526549

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MYPLFQVHHKGNENLDLLYPVSIVIYEKIEHPLRVSILLHEL*

>peptide 2 (30 aa)
PPINGNGTLRKISSCDMSYYPLITYTTPNI*

Sequence

>CNT30526549
CCACCCATTAATGGTAATGGAACTCTGCGCAAAATTTCCTCTTGTGATATGAGTTACTATCCCTTGATCACTTATACTACCCCAAACATCTGACTGCATT
TTCTAACTGAAATGGAAAATGACTACCGAAATTGAATTGTACATCTAAAATAGTCCTAAGAAGACATGATCTCAAGCGGATACTTGGCATGTACCCCCTC
TTCCAGGTCCATCACAAGGGAAATGAAAACCTAGATTTGCTTTATCCGGTATCAATAGTGATCTACGAGAAAATAGAACACCCTTTAAGAGTATCAATAT
TGTTACATGAATTGTAAATGCATGAATATGATGGACCAAAAAATCCACAGTTCCTAATGGAATAGGTAACAAAGCAACTTTACTGCCTATTGCTACTAAA
TTTTCACCTCCCCAAGTGAAACTGGTACTTGTTGCTACACCTGGGGTTGTTGTACCAGGTGCTAAAGCGTGGGTATTTTGGATCCATTGAGCAAAGATCG
GTTGTAAATGTATAGCGGTATCTGAAAACATATCTTGAGGGCGCCCTAAAGCGCTCATGGTATCATTATGAATATACAAACCAAAACTGTGAAAACCTAA
AAAGATATATACTCAGTTAAGATGTGATATGATTGCATCACGATGTCTAAGGACACGATC