Detailed information on CNT30621618


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GG97|PSAA_PHAVU, E-value = 4e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Cajanus cajanOryza sativa1008.5987.24478forward
CNT30730522Cajanus cajanCorchorus capsularis48.1233.1993.91230forward
CNT30201935Cajanus cajanPisum sativum98.3327.5893.62470forward
CNT30219784Cajanus cajanHordeum vulgare45.446.5790.78217forward
CNT3086956Cajanus cajanVigna radiata53.779.3894.16257forward
CNT301761Cajanus cajanZea mays99.168.3688.4474forward
CNT30627894Cajanus cajanDaucus carota39.1218.3389.3187forward
CNT30688863Cajanus cajanTriticum urartu10022.7388.49478forward
CNT30595862Cajanus cajanOryza meridionalis100.4243.8486.88480forward
CNT30430934Cajanus cajanPapaver somniferum98.957.2491.54473forward
CNT3057361Cajanus cajanAmborella trichopoda90.388.5987.27432forward
CNT30585620Cajanus cajanEchinochloa crusgalli99.169.2488.61474forward
CNT30333024Cajanus cajanCynara cardunculus71.1333.3789.12340forward

Expression of CNT30621618

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLSKSEKNQRLFVFLGTLPLHHHLIFLGPLLAKPPE

>peptide 2 (29 aa)
MVIQHRFHILKPSQFWSSFVIMEPTSKKH*

Sequence

>CNT30621618
TGCGTATTTTGACTAATTCAAGGTGAAAAATGGGGTAGCTCCCTCGGCAAAACTTGGATAAATTTGAGCCAAAAGATCCCGATTCAGGATAAATTCATGA
GGAAGTGGGATTTCTTTGGGATCTACTGCAGCATTTAGAAATTGGTTAATTGGTAAAGATACATGTATTTGATGTCCTGCCCAAGAAAGAGAGCCCAATC
CTAGTAACCCTGTCAAATGGTGATTCAACATAGATTCCACATCTTGAAACCAAGCCAATTTTGGAGCAGCTTTGTGATAATGGAACCAACCAGCAAAAAG
CATTAAGGCTGCAAAGACCAATGCACCAATTGCGGTACAATAGAGTTGTAATTCATTAGTTATTCCAGATGCTCTCCAAATCTGAAAAAAACCAGAGGTT
ATTTGTATTCCTCGGAACCCTCCCCCTACATCACCATTTAATATTTCTTGGCCCACTATTGGCCAAACCACCTGAGCA