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Detailed information on CNT30217417


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXV8|YCF3_HELAN, E-value = 9e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Kalanchoe fedtschenkoiOryza sativa81.416.8590.81381forward
CNT30529029Kalanchoe fedtschenkoiEucalyptus grandis47.4410.8491.44222forward
CNT30618958Kalanchoe fedtschenkoiSesamum indicum81.846.8795.3383forward
CNT3020650Kalanchoe fedtschenkoiCitrullus lanatus80.3421.6191.49376forward
CNT30730408Kalanchoe fedtschenkoiCorchorus capsularis81.8480.9790.86383forward
CNT30632297Kalanchoe fedtschenkoiVigna unguiculata81.8421.6689.56383forward
CNT30201080Kalanchoe fedtschenkoiPisum sativum81.8419.2491.12383forward
CNT3047566Kalanchoe fedtschenkoiPrunus dulcis47.4411.5194.59222forward
CNT30194121Kalanchoe fedtschenkoiSecale cereale81.4142.5787.66381forward
CNT30390237Kalanchoe fedtschenkoiTriticum turgidum47.4410.2790.54222forward
CNT30589320Kalanchoe fedtschenkoiMusa acuminata23.2922.4390.83109forward
CNT30237795Kalanchoe fedtschenkoiBrassica oleracea47.445.7992.79222forward
CNT30510815Kalanchoe fedtschenkoiSolanum lycopersicum47.8646.9691.07224forward
CNT30556045Kalanchoe fedtschenkoiOryza glaberrima81.4111.6790.81381forward
CNT30171250Kalanchoe fedtschenkoiTrifolium pratense20.7326.5891.7597forward
CNT30598583Kalanchoe fedtschenkoiFraxinus excelsior57.6927.1194.81270forward
CNT30445979Kalanchoe fedtschenkoiSaccharum spontaneum81.4196.9588.19381forward
CNT3017916Kalanchoe fedtschenkoiZea mays81.4118.4887.93381forward
CNT30232528Kalanchoe fedtschenkoiAnanas comosus81.8419.3589.3383forward
CNT30655373Kalanchoe fedtschenkoiRosa chinensis81.849.1589.56383forward
CNT30627898Kalanchoe fedtschenkoiDaucus carota81.8412.4491.64383forward
CNT30689226Kalanchoe fedtschenkoiTriticum urartu34.48.6888.2161forward
CNT30595954Kalanchoe fedtschenkoiOryza meridionalis73.9326.3591.62346forward
CNT30360010Kalanchoe fedtschenkoiLactuca sativa49.3621.5190.04231forward
CNT30430934Kalanchoe fedtschenkoiPapaver somniferum81.845.8692.17383forward
CNT3057361Kalanchoe fedtschenkoiAmborella trichopoda47.014.3790.45220forward
CNT3022800Kalanchoe fedtschenkoiPopulus trichocarpa72.6510090340forward
CNT30332506Kalanchoe fedtschenkoiDioscorea rotundata81.4141.8289.24381forward
CNT30149145Kalanchoe fedtschenkoiBrachypodium distachyon81.4121.2187.14381forward
CNT30103542Kalanchoe fedtschenkoiOryza rufipogon79.9152.7587.7374forward
CNT30604206Kalanchoe fedtschenkoiOryza punctata39.3246.2389.67184forward
CNT30114189Kalanchoe fedtschenkoiFicus carica82.489.893.01386forward

Expression of CNT30217417

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MSFNIIPRSKCYSLFPILSGLVEPSLRNFRIALSNGLFSPVGIDHGHIIKSLG*

Sequence

>CNT30217417
TAATGAAATTTATTTACTTTTCCAAGAAGAATAATCAGACTGATAGGGACAGTAAACAATTCATTCTAACAAAAAACTAGTCTTATTATTCAAAACGCCT
CGTGATCTTCAACCAATTATGAGCTTCAATATAATTCCCAGGAGTAAGTGCTATAGCTTGTTTCCAATACTCAGCGGCTTGGTCGAACCAAGCCTCCGCA
ATTTCAGAATCGCCTTGTCGAATGGCCTGTTCTCCCCGGTCGGAATAGATCACGGCCATATTATTAAAAGCTTGGGGTAAGAATGGGTTTCGTTCTAGTG
CTCGAAAATAATATTCCAAAGCTTTGGTATGTTCTCCATTACTTGTGTGGATAAGTCCTATATTATAGAGTATATAACTTCGATCATAGGGATCTATTTC
TAATCGCATAGCTTCATAATAATTCTGTAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCC