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Detailed information on CNT30730408


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MTP0|YCF3_OENEH, E-value = 8e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30529029Corchorus capsularisEucalyptus grandis63.8514.7591.39302forward
CNT30618958Corchorus capsularisSesamum indicum93.667.9591.65443forward
CNT3020650Corchorus capsularisCitrullus lanatus95.1425.8694450forward
CNT30632297Corchorus capsularisVigna unguiculata94.7125.3487.28448forward
CNT30201085Corchorus capsularisPisum sativum93.8721.9892.12444forward
CNT3047566Corchorus capsularisPrunus dulcis63.4215.5594300forward
CNT3094383Corchorus capsularisSolanum tuberosum18.8241.494.3889reverse complement
CNT30194121Corchorus capsularisSecale cereale90.9148.0490.7430forward
CNT30390237Corchorus capsularisTriticum turgidum63.6413.9390.37301forward
CNT30589320Corchorus capsularisMusa acuminata27.726.9590.84131forward
CNT30237795Corchorus capsularisBrassica oleracea63.427.8292.67300forward
CNT30510815Corchorus capsularisSolanum lycopersicum50.7450.3188.33240forward
CNT30556045Corchorus capsularisOryza glaberrima91.3313.2487.96432forward
CNT30171250Corchorus capsularisTrifolium pratense20.5126.5893.8197forward
CNT30598583Corchorus capsularisFraxinus excelsior57.0827.1189.26270forward
CNT30445979Corchorus capsularisSaccharum spontaneum78.0193.8991.06369forward
CNT3017916Corchorus capsularisZea mays90.9120.8590.7430forward
CNT30232528Corchorus capsularisAnanas comosus93.8722.4491.44444forward
CNT30217417Corchorus capsularisKalanchoe fedtschenkoi80.9781.8490.86383forward
CNT30655373Corchorus capsularisRosa chinensis95.1410.7593.56450forward
CNT30627898Corchorus capsularisDaucus carota93.6614.3995.03443forward
CNT30595954Corchorus capsularisOryza meridionalis86.4731.1588.51409forward
CNT30360010Corchorus capsularisLactuca sativa48.8421.5195.24231forward
CNT3057361Corchorus capsularisAmborella trichopoda63.425.9688.67300forward
CNT3022800Corchorus capsularisPopulus trichocarpa71.8810092.65340forward
CNT30332506Corchorus capsularisDioscorea rotundata93.4548.5285.97442forward
CNT30149145Corchorus capsularisBrachypodium distachyon90.9123.9490.93430forward
CNT30103542Corchorus capsularisOryza rufipogon76.5351.0690.61362forward
CNT30604206Corchorus capsularisOryza punctata41.2348.9988.72195forward
CNT30114189Corchorus capsularisFicus carica93.6611.2590.29443forward

Expression of CNT30730408

Sequence

>CNT30730408
AAATAAACAGAGGGGTCTTGTCTTGTTCTTATTCGAAACGCCTCGTGATCTTTAACCAATTTTGCGCTTCAATATAATTACCAGGAGTAAGCGCTATAGC
CTGTTTCCAATACTCAGCGGCTTGATCGAACCAAGCCTCCGCTATTTCAGAATCCCCCTGTCGAATGGCCTATAGTCGCACGTAATGACAGATCACAGCC
ATATTATTAAAAGCTTGTGGTAAGAACGGGTTTCGTTCGAGTGCTCGAAAATAATATTCTAAAGCTTTTGTATGTTCTCCGTTACTTGTGTGGATAAGGC
CTATGTTATAGAGTATATAACTTCGATCGTAGGGATCGATTTCTAGTCGCATAGCTTCATAATAATTCTGTAAGGCTTCCGCATAATTTCCTTCGGATTG
AGCCGACATCCGTTACGGTCGTCATTCGATTCAAAGAATTCTCCGTTCCAAAACCGTACGTGAGATTTTCACC