Detailed information on CNT30367191


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9T2L6|PSAA_SORBI, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3057361Sorghum bicolorAmborella trichopoda1005.2982.33266forward

Expression of CNT30367191

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MIRSGYLTCSPLPRSGAREAKAKICFIRFQTGTASK*

>peptide 2 (55 aa)
IDPRKHDPERILDMFPLAQVRRKGSESQDLLYQVSDGNCKQIKHLSKVLIQSHGW*

Sequence

>CNT30367191
AATAGACCCAAGAAAACATGATCCGGAGCGGATACTTGACATGTTCCCCCTTGCCCAGGTCCGGCGCAAGGGAAGCGAAAGCCAAGATTTGCTTTATCAG
GTTTCAGACGGGAACTGCAAGCAAATAAAACACCTGTCAAAAGTATTAATACAGTCACATGGATGGTAAATGCGTGAATGTGATGGACTAAAAAATCTGC
GGTTCCTAATAGAATAGGTAACAAAGTTGCTTTGCCGCCTACAGCTACTAACTCGCCGCCTCCCCA