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Detailed information on CNT30632355


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30529029Vigna unguiculataEucalyptus grandis50.1221.2488.05435forward
CNT30618959Vigna unguiculataSesamum indicum69.79.6185.95605forward
CNT3047566Vigna unguiculataPrunus dulcis69.8231.4287.29606forward
CNT3094383Vigna unguiculataSolanum tuberosum24.7710082.79215reverse complement
CNT30194121Vigna unguiculataSecale cereale36.8735.7589.69320forward
CNT30390237Vigna unguiculataTriticum turgidum37.915.2288.45329forward
CNT30589320Vigna unguiculataMusa acuminata16.1328.8191.43140forward
CNT3084769Vigna unguiculataVigna radiata27.344.8994.94237reverse complement
CNT30237795Vigna unguiculataBrassica oleracea37.218.4291.33323forward
CNT30510815Vigna unguiculataSolanum lycopersicum27.7650.5288.8241forward
CNT30171250Vigna unguiculataTrifolium pratense11.5227.497100forward
CNT30446760Vigna unguiculataSaccharum spontaneum27.7621.3592.12241forward
CNT3018049Vigna unguiculataZea mays36.989.6890.97321forward
CNT30232528Vigna unguiculataAnanas comosus36.8716.1790.94320forward
CNT30655383Vigna unguiculataRosa chinensis70.0516.9786.18608forward
CNT30214788Vigna unguiculataHelianthus annuus16.1343.8982.86140forward
CNT30595988Vigna unguiculataOryza meridionalis37.931.4889.67329forward
CNT3057361Vigna unguiculataAmborella trichopoda37.336.4488.58324forward
CNT3022800Vigna unguiculataPopulus trichocarpa25.5865.2992.34222forward
CNT30604206Vigna unguiculataOryza punctata22.4748.9987.18195forward

Expression of CNT30632355

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MFSVTCVNKAYVIKYITSIIGINFQSHSLIIIL*

>peptide 2 (46 aa)
MLPLSIRSFIHRKRGYLDISISSYFYFYEVSLLQLIKIVVLNDIYM*

Sequence

>CNT30632355
TATCGATTGAAAACCGTGTTAATTGATCCTTACGATGCTTCCTTTATCAATTAGATCTTTTATCCATAGAAAAAGAGGGTATCTAGACATATCGATTTCT
TCATATTTTTACTTCTATGAAGTTTCTTTGCTACAGCTGATAAAAATCGTTGTTTTGAACGATATATATATGTAGAAAGCCTTTATTATTTATAATTATT
TCTATTTATAGATTTATTATATTAAAATTTGTGGATTTGCTTGTTCTTTTCTTTTTTCTTTCTATAGTGGAGATAGTCGCACGTAATGACAGATCACGGC
CATATTATTAAAAGCTTGGGGTAAAAATGGGTTTCGTTCGAGCGCCCGAAAATAATATTCCAAAGCTTTAGTATGTTCTCCGTTACTTGTGTGAATAAGG
CCTATGTTATAAAGTATATAACTTCGATCATAGGGATCAATTTCCAGTCGCATAGCCTCATAATAATTCTGTAAAGCTTCTGCATAATTTCCTTCAGATT
GAGCTGACATCCGTTACGGTCGTCATTCGGTTCAAAGAATCTCCGCTCCAGAACTGTACGTGAGATTTTCATCTCATACGGCTCCCCCCTTATGTGTGTA
ATGAGAAAAATCCATCAAATCAAAAAATATTCCAGTATTCTCATTCTCAACTGAACAGAGCTAGTGTTTTTACAATAAATCTCTAGCCAACCTTCCTGTC
AAAAATTATTTCTTAACATTAAGTATGTAGGTACTTGATAAAAAAACAAGAACTTCAACAATTTCTTTGTCCTCTACGCTGCTTAATTTCCTGGAATTAG
TCACCTCAATAATCTTCGATGGTTCTATGGGTATCCAAAATATGAACGAGATGGATATTTATTGTCCC