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Detailed information on CNT30688863


BLAST search results

BLAST vs Swiss-Prot:
sp|P58311|PSAA_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONVVIT000008, E-value = 3e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Triticum urartuOryza sativa79.1729.9295.261665forward
CNT30675574Triticum urartuSetaria viridis7.8571.1296.97165forward
CNT3021628Triticum urartuCitrullus lanatus6.4757.1495.59136forward
CNT30526549Triticum urartuPhaseolus vulgaris31.3810084.85660forward
CNT30201935Triticum urartuPisum sativum76.9995.0188.081619forward
CNT30167792Triticum urartuPistacia vera12.8981.8787.45271forward
CNT30224362Triticum urartuHordeum vulgare38.1850.5798.88803forward
CNT301761Triticum urartuZea mays99.9537.0996.292102forward
CNT30713469Triticum urartuMalus domestica golden21.168989.66445forward
CNT30627902Triticum urartuDaucus carota25.0158.9788.97526forward
CNT30621618Triticum urartuCajanus cajan22.7310088.49478forward
CNT30595862Triticum urartuOryza meridionalis37.0471.1494.48779forward
CNT30430934Triticum urartuPapaver somniferum99.7132.190.612097forward
CNT3057361Triticum urartuAmborella trichopoda80.533.6585.061693forward
CNT30147758Triticum urartuBrachypodium distachyon16.4538.5795.95346forward
CNT30497263Triticum urartuDigitaria exilis17.2151.3594.2362forward
CNT30115505Triticum urartuOryza nivara20.4100.792.31429forward
CNT30333024Triticum urartuCynara cardunculus47.1797.3587992forward

Expression of CNT30688863

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MALSCKWALVSLQNIFKSMANTPIGPIHMTCD*

>peptide 2 (34 aa)
MSYHPLITYSTPNIRLHFPTEMENDYRNCIVHPE*

>peptide 3 (29 aa)
MTCDACAHKKSRSHPLIVMELCAKFPPVI*

>peptide 4 (30 aa)
MLAKAEKNQRLFGFLGNPRLHHHSIFLALL*

>peptide 5 (39 aa)
KVRSKNVLIKTFLSNIIMTFKIMCGSNTKPNTTSSGVLS*

>peptide 6 (42 aa)
MFPLGQAHRKESENLDLLYRVSNGNSEQIKHLSKVLIQSHVW*

Sequence

>CNT30688863
CAAAGTGAGAAGCAAAAATGTTCTGATAAAGACGTTCCTCAGTAATATCATCATGACTTTCAAAATCATGTGCGGTAGCAATACCAAACCAAATACGACG
AGTAGTGGGGTCCTGAGCTAAGCCTTGGCTAAACCTGGGAAATCTTAATTCCATAATGCCTTTCAAAACCTCCTAGCCACTATCCTACTGCAATAATTCT
TGCTAAGAAGAATGCCCATGTCGTGGCAATTCCACCCAGAAGGTAATGGGTTACTCCTACAGCACGTCCTTGTATAATGCTCAAGGCTCTAGGCTGAGTA
GCAGGAGCAACTTTTAATTTGTTATGAGCCCAAACGATAGATTCAATGAGTTCTTGCCAATAACCACGGCCGCTGAATAAAAACATTAAACTGAAGGCCC
AGACAAAATGAGCACCTAAGAAAAAAAGACCATATGCAGATAATGAAGAACCATAAGACTGAATGACTTGCGATGCCTGTGCCCACAAGAAATCTCGAAG
CCACCCATTAATCGTAATGGAACTCTGTGCAAAGTTTCCCCCTGTAATATGAGTTACCACCCCTTGATCACTTATAGTACCCCAAACATCCGACTGCATT
TTCCAACTGAAATGGAAAATGACTACCGAAATTGCATTGTACATCCAGAATAAACCTAAGAAAACATGATCCCAGGCGGATACTTGACATGTTCCCCCTC
GGCCAGGCCCATCGCAAGGAAAGCGAAAACCTAGATTTGCTTTATCGGGTATCAAACGGGAACTCCGAGCAAATAAAACACCTTTCAAAAGTATTAATAC
AGTCACATGTATGGTAAATGCATGAATGTGATGGACTAAAAAATCTGCGGTTCCTAATGGAATAGGTAACAAAGCCACTTTGCCACCTACTGCTACTAAC
TCGCCGCCTCCCCACGTTAAGCTAGTACTTGTTGTTGCACCAGGAGCTGTTACGCCAGGCGCAGTAGCATGGATATTTTGTACCCATTGAGCAAAGATAG
GTTGTAATTGTATGGCAGTATCCGAAAACATATCTTGTGGACGGCCTAAAGCACTCATGGTATCATTATGAATGTACAAGCCAAAACTGTGAAAACCTAG
AAATATACATACCCAGTTAAGGTGGGATATGATTGCATCGCGGTGTCTAAGGACGCGATCTAATAGATCGTTGTATCGAGTAGTTGGATCATAGTCTCTT
ACCATAAAAATTGCTGCATGTGCAGCAGCACCGACTATTAGAAATCCGCCAATCCACATGTGGTGTGTGAACAAGGAAAGTTGTGTACCATAGTCAGTAG
CTAGGTATGGATAGGGAGGCATAGAATACATATGATGAGCTACAACAATGGTTGTAGAGCCTAGCATAGCTAGGTTAAGAGATAATTGAGCATGCCATGA
CGTTGTTAAGATTTCATAAAGACCCTTATGGCCTTGTCCTGTAAATGGGCCCTTGTGAGCCTCCAAAATATCTTTAAGTCCATGGCCAATACCCCAATTG
GTCCTATACATATGACCTGCGATTAGGAAAAGAATAGCAATAGCTAAATGATGGTGCGCAATATCGGTCAGCCAGAGACCACCGGTTACTGGATCTAGTC
CTCCGCGAAAAGTCAGAAATTCTGCGTATTTGGACCAATTTAAAGTGAAAAAAGGGGTTGCTCCTTCGGCAAAACTAGGATAAAGTTGAGCCAAAAGGTC
CCGATTCAAGATAAATTCATGAGGAAGTGGTATCTCTTTAGGATCCACCCCAGCGTCAAGAAATTGGTTAATTGGTAAAGATACATGAATTTGGTGCCCC
GCCCAAGAAAGAGACCCAAGTCCTAATAATCCCGCTAAGTGGTGATTCAACATGGATTCTACATCTTGGAACCAGGCCAATTTGGGAGCGGCTTTGTGAT
AATGGAACCAACCAGCAAAAAGCATTAACGCTGCAAAAATCAATGCACCAATTGCAGTACAATAGAGTTGTAATTCACTAGTTATTCCAGATGCTCGCCA
AAGCTGAAAAAAACCAGAGGTTATTTGGATTCCTCGGAAACCCCCGCCTACATCACCATTCAATATTTCTTGCCCTACTATAGGCCAAACTACCTGAGCA
CTG