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Detailed information on CNT30171250


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696451Trifolium pratenseOryza sativa27.671.8293.07101forward
CNT30529029Trifolium pratenseEucalyptus grandis27.674.9392.08101forward
CNT30618959Trifolium pratenseSesamum indicum26.581.5491.7597forward
CNT3020650Trifolium pratenseCitrullus lanatus27.675.893.07101forward
CNT30730408Trifolium pratenseCorchorus capsularis26.5820.5193.8197forward
CNT30632355Trifolium pratenseVigna unguiculata27.411.5297100forward
CNT30201080Trifolium pratensePisum sativum27.675.0799.01101forward
CNT3047566Trifolium pratensePrunus dulcis27.45.1894100forward
CNT30181476Trifolium pratenseSecale cereale27.6739.6192.08101forward
CNT30390237Trifolium pratenseTriticum turgidum27.674.6791.09101forward
CNT30237795Trifolium pratenseBrassica oleracea27.672.6391.09101forward
CNT30510815Trifolium pratenseSolanum lycopersicum26.5820.3490.7297forward
CNT30556045Trifolium pratenseOryza glaberrima27.673.0993.07101forward
CNT30445979Trifolium pratenseSaccharum spontaneum27.6725.793.07101forward
CNT3017916Trifolium pratenseZea mays27.44.8593100forward
CNT30232528Trifolium pratenseAnanas comosus27.675.193.07101forward
CNT30217417Trifolium pratenseKalanchoe fedtschenkoi26.5820.7391.7597forward
CNT30655373Trifolium pratenseRosa chinensis27.672.4193.07101forward
CNT30627898Trifolium pratenseDaucus carota25.753.0593.6294forward
CNT30595954Trifolium pratenseOryza meridionalis27.677.6993.07101forward
CNT30430934Trifolium pratensePapaver somniferum27.671.5595.05101forward
CNT3057361Trifolium pratenseAmborella trichopoda27.672.0189.11101forward
CNT3022800Trifolium pratensePopulus trichocarpa27.6729.7192.08101forward
CNT30332506Trifolium pratenseDioscorea rotundata25.7510.3294.6894forward
CNT30149145Trifolium pratenseBrachypodium distachyon27.675.6291.09101forward
CNT30103542Trifolium pratenseOryza rufipogon27.6714.2593.07101forward
CNT30604206Trifolium pratenseOryza punctata27.6725.3892.08101forward
CNT30114189Trifolium pratenseFicus carica26.582.4693.8197forward

Expression of CNT30171250

Peptides detected in this lncRNA

>peptide 1 (68 aa)
CPKIVFQSFCMFSVTCVYKAYVIKYITSIIGINFHLIRLLLYVHNEMINIHGIKSKKIVILALSTEWD*

Sequence

>CNT30171250
TGCCCGAAAATAGTATTCCAAAGCTTTTGTATGTTCTCCGTTACTTGTGTGTATAAGGCCTATGTTATAAAGTATATAACTTCGATCATAGGGATCAATT
TTCATCTCATACGGCTCCTCCTTTATGTGCATAATGAAATGATAAACATCCATGGAATCAAATCAAAAAAGATTGTAATATTGGCATTATCAACTGAGTG
GGACTAGTGTTGTTTTCCATTTTCCGAACATACATATTTCCTCATCATACCATCCTTTCTTTTTTTACTTTTTTACTTTGTTCATCTGACTCATGTAGCT
AACTTTACTCAGCAGCATAGTGCTTGGTGGCGGTTGTTGTTCTTGTTATGTGCTATAGCTAACTT