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Detailed information on CNT30588877


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618959Musa acuminataSesamum indicum81.683.5488.34223reverse complement
CNT3020650Musa acuminataCitrullus lanatus77.6612.1888.68212reverse complement
CNT30201723Musa acuminataPisum sativum49.084.8590.3134reverse complement
CNT30170457Musa acuminataPistacia vera64.8413.9488.14177reverse complement
CNT30193829Musa acuminataSecale cereale78.7513.7884.19215reverse complement
CNT30510689Musa acuminataSolanum lycopersicum21.9810.4591.6760reverse complement
CNT30232528Musa acuminataAnanas comosus98.913.6494.07270reverse complement
CNT30713835Musa acuminataMalus domestica golden43.2216.191.53118forward
CNT30627898Musa acuminataDaucus carota79.127.0285.65216reverse complement
CNT30596972Musa acuminataOryza meridionalis78.7517.1984.19215reverse complement
CNT30430934Musa acuminataPapaver somniferum89.383.7390.16244reverse complement
CNT3057361Musa acuminataAmborella trichopoda78.024.2385.92213reverse complement
CNT30103640Musa acuminataOryza rufipogon78.7528.184.19215reverse complement
CNT30116311Musa acuminataOryza nivara61.945.0784.62169reverse complement
CNT30550879Musa acuminataOryza brachyantha42.1228.6886.09115forward
CNT30114189Musa acuminataFicus carica63.744.4287.93174reverse complement

Expression of CNT30588877

Peptides detected in this lncRNA

>peptide 1 (44 aa)
RSTTPRNQQHKNFVINYPFPYRYRGQQEWLGQQTSISFVLWVPV*

Sequence

>CNT30588877
AAGAAGCACTACACCTAGGAATCAACAACACAAAAACTTTGTTATAAATTACCCTTTTCCTTATCGCTATCGAGGCCAACAAGAATGGTTGGGACAACAA
ACATCCATCTCGTTCGTACTTTGGGTACCCGTATAACCATCAAAGATAGTTGAAGTGACTAATTCCTGGAAATAGGGGGCGTTGAGGACAAAGAAATTGT
TGGAGTTACCATTTCCATCTAGCACTAATACGATTGGTGTTAAGAAAAAAACTCTTGCGGGAAGGCTGGCTAG