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Detailed information on CNT30147758


BLAST search results

BLAST vs Swiss-Prot:
sp|P58311|PSAA_WHEAT, E-value = 4e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30194074Brachypodium distachyonSecale cereale20.0718.7596.67180forward
CNT30688863Brachypodium distachyonTriticum urartu38.5716.4595.95346forward
CNT30152144Brachypodium distachyonPrunus persica17.8475.1285.62160forward
CNT3057361Brachypodium distachyonAmborella trichopoda37.576.783.98337forward
CNT30115505Brachypodium distachyonOryza nivara38.0280.0590.03341forward

Expression of CNT30147758

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MFRLAQAHRKESENRDLLYQVSNGNCEQIKHLNCVNVMD*

>peptide 2 (34 aa)
MSYHPLITYSTPNIRLHFPTEMENDYRNCIVHPE*

>peptide 3 (36 aa)
MIPSRYLTCSASPRPIVRKAKTEICFIRYQTGTASK*

Sequence

>CNT30147758
AGTATGCGCTTCTAAAAGATCTTTGATACTGTGTCCAATTCCGAAGTTAGTTCGATACATGTGACCGGCGATGAGAAAAATAAATGCAATAGCTAAATGA
TGGTGCGCAATATCGGTCAGCCACAAACTTTGTGTTTGTGGATGGAATCCACCAAGAAGAGTTAGAATGGCAGTTCCCGCTCCTTGAGTGGTACCAAATA
AATGATAATGAAGAACCATAAGACTGAATTACTTGCGATGCCTGTGCCCACAAGAAATCTCAAAGCCACCCATTAATCGTAATGGAACTCTGTGCAAAGT
TCCCCTTGTGATATGAGTTACCACCCCTTGATCACTTATAGTACCCCAAACATCCGATTGCATTTTCCAACTGAAATGGAAAATGACTACCGAAATTGCA
TTGTACATCCAGAATAAACCTAAGAAAACATGATCCCAAGCAGATACTTGACATGTTCCGCCTCGCCCAGGCCCATCGTAAGGAAAGCGAAAACCGAGAT
TTGCTTTATCAGGTATCAAACGGGAACTGCGAGCAAATAAAACACCTTAACTGCGTGAATGTGATGGACTAAAAAAATCTGCAGTTCCTAATGGAATAGG
TAACAAAGCCACTTTGCCGCCTACTGCTACTAACTCGCCACCTCCCCACGTTAAACTGGTACTTGTCGTTGCACCAGGAGCTGTTACACTAGGCGCGTTA
GCATGGATATTTTGTACCCATTGAGCAAAGATAGGTTGTAATTGTATGGCAGTATCCGAAAACATATCTTGCGGACGTCCTAAAGCACTCATGGTATCAT
TATGAATGTACAAACCAAAACTGTGAAAACCTAGAAATATACATACCCAGTTAAGGTGGGATATGATTGCATCACGGTGTCTAATGACGCGATCAAA