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Detailed information on CNT30207455


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 3e-115

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Helianthus annuusOryza sativa28.1414.1981.72186forward
CNT30677202Helianthus annuusSetaria viridis14.5222.9784.3896forward
CNT30640893Helianthus annuusNymphaea colorata31.9223.3781.04211forward
CNT30314796Helianthus annuusCorylus avellana29.9528.8281.82198forward
CNT30518741Helianthus annuusJuglans regia16.1921.5785.05107forward
CNT30702712Helianthus annuusQuercus lobata42.9733.9379.23284forward
CNT30273043Helianthus annuusChenopodium quinoa32.688.6581.94216forward
CNT30727836Helianthus annuusCorchorus capsularis2340.8683.55152forward
CNT30380779Helianthus annuusManihot esculenta36.9139.1780.74244forward
CNT30405165Helianthus annuusBeta vulgaris23.1529.279.74153forward
CNT30200362Helianthus annuusPisum sativum14.5234.4187.596forward
CNT30494492Helianthus annuusOlea europaea20.8827.4483.33138forward
CNT30710704Helianthus annuusGlycine max27.2323.1480.56180forward
CNT30295969Helianthus annuusTriticum aestivum9.8328.1490.7765forward
CNT30392715Helianthus annuusTriticum turgidum9.8328.1490.7765forward
CNT30586189Helianthus annuusMusa acuminata24.9623.1183.03165forward
CNT30541563Helianthus annuusBrassica napus21.1820.9981.43140forward
CNT30145300Helianthus annuusMedicago truncatula14.6744.587.6397forward
CNT30258087Helianthus annuusAvena sativa28.1439.7483.33186forward
CNT30663719Helianthus annuusTriticum dicoccoides9.8324.990.7765forward
CNT30261343Helianthus annuusBrassica rapa2328.7384.21152forward
CNT30462400Helianthus annuusSaccharum spontaneum24.3611.8379.5161forward
CNT306434Helianthus annuusZea mays23.4561.5180.65155forward
CNT30610723Helianthus annuusGossypium raimondii43.1255.2381.05285forward
CNT30216367Helianthus annuusKalanchoe fedtschenkoi14.0725.6986.0293forward
CNT3068263Helianthus annuusLeersia perrieri22.3919.4581.08148forward
CNT30128108Helianthus annuusCorymbia citriodora16.3420.6583.33108forward
CNT30345066Helianthus annuusEragrostis tef33.7440.478.92223forward
CNT30479625Helianthus annuusArabidopsis halleri14.8329.6186.7398forward
CNT30365786Helianthus annuusSorghum bicolor15.7340.1582.69104forward
CNT30620107Helianthus annuusCajanus cajan26.1712.4584.39173forward
CNT30355905Helianthus annuusLactuca sativa17.130.0586.73113forward
CNT30570331Helianthus annuusVitis vinifera35.8540.1783.12237forward
CNT30319836Helianthus annuusAsparagus officinalis22.2418.4285.03147forward
CNT3037127Helianthus annuusCucumis melo24.6630.2482.82163forward
CNT30117905Helianthus annuusOryza nivara28.1416.181.72186forward
CNT30604735Helianthus annuusOryza punctata20.7316.2581.02137forward
CNT30334895Helianthus annuusCynara cardunculus60.8298.7785.32402forward
CNT30725414Helianthus annuusLupinus angustifolius25.4218.8680.95168forward

Expression of CNT30207455

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MNKSSSLHGLKTSTQIHSICCFNLVDIALNKHALFRLLGFTLTGVFPELSQ*

>peptide 2 (41 aa)
MKKAESVRSNLFGCGPFFAVGTRCNHAWFQEDAFKHHVVFG*

>peptide 3 (29 aa)
MSSNKCSEGPVRMKTTRAMGSGFGSLHSS*

Sequence

>CNT30207455
AAAAACTTATAGGATTGCTAGAAGTAGTCAAGTAGATATGCTATGAACAAAAGTAGCAGTCTCCATGGGCTAAAGACATCAACACAAATTCATAGTATAT
GTTGTTTTAACTTAGTAGACATAGCCCTTAACAAACATGCCCTTTTTCGCCTCCTCGGATTCACCCTCACCGGTGTATTTCCCGAGCTGAGCCAGTGAGT
TGGCACTAGCCCTCTGCAGCAAAGCATCTTGAGCCGCCTTCACATTCTCGGGCCTTCCTCCCCATGTCTTCAAACAAGTGTTCTGAAGGGCCCGTGCGTA
TGAAAACGACACGTGCCATGGGTTCGGGCTTTGGTTCATTGCATTCAAGTTGAGTGTAGCCTCCACCTCGGATTGTCCACCCGACAAAAACTGCATTTTA
GGAACCGCAGGCGGGATTCTTCTATGAAGAAGGCTGAGAGTGTAAGAAGCAACTTGTTCGGGTGTGGCCCGTTCTTTGCAGTCGGCACCAGGTGTAACCA
TGCTTGGTTTCAAGAGGATGCCTTCAAACATCACGTTGTTTTCGGCTAAGTAAAAGAACACTTCAGCCCACACCTTTTGTGCAACCTCAAAGGTCCTGTC
AATTCCGTGCTCTCCATCAAGCAATATCTCGGGCTCGACAATTGGGACCAGCCCGTTGTCC