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Detailed information on CNT30586189


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 5e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Musa acuminataOryza sativa23.6712.8985.21169forward
CNT30677085Musa acuminataSetaria viridis24.2333.487.28173forward
CNT30524487Musa acuminataSetaria italica23.1112.3787.27165forward
CNT30640893Musa acuminataNymphaea colorata26.0520.681.18186forward
CNT30314796Musa acuminataCorylus avellana45.3847.1681.48324forward
CNT30518741Musa acuminataJuglans regia23.3933.6783.83167forward
CNT30702585Musa acuminataQuercus lobata16.3950.6587.18117forward
CNT30374484Musa acuminataArabidopsis thaliana22.5537.8883.85161forward
CNT30273043Musa acuminataChenopodium quinoa35.0110.0280250forward
CNT30381313Musa acuminataManihot esculenta19.1924.3381.75137forward
CNT30200362Musa acuminataPisum sativum17.7945.5281.1127forward
CNT30708796Musa acuminataGlycine max20.7330.9681.08148forward
CNT30297329Musa acuminataTriticum aestivum11.4835.1989.0282forward
CNT30390900Musa acuminataTriticum turgidum25.2126.0187.22180forward
CNT30541563Musa acuminataBrassica napus23.3925.0482.04167forward
CNT30237267Musa acuminataBrassica oleracea23.8120.9682.94170forward
CNT30258087Musa acuminataAvena sativa25.7739.3288.04184forward
CNT30663719Musa acuminataTriticum dicoccoides10.3628.3589.1974forward
CNT30263618Musa acuminataBrassica rapa23.8124.1882.35170forward
CNT30139084Musa acuminataLolium perenne22.6919.3382.72162forward
CNT306434Musa acuminataZea mays29.6984.1383.96212forward
CNT30610790Musa acuminataGossypium raimondii33.3377.7883.19238forward
CNT30216367Musa acuminataKalanchoe fedtschenkoi24.2347.7984.39173forward
CNT3068263Musa acuminataLeersia perrieri21.1519.8487.42151forward
CNT30207455Musa acuminataHelianthus annuus23.1124.9683.03165forward
CNT30348318Musa acuminataEragrostis tef33.3331.6583.19238forward
CNT30365623Musa acuminataSorghum bicolor32.2120.6181.74230forward
CNT30620107Musa acuminataCajanus cajan23.2511.9480.12166forward
CNT30570332Musa acuminataVitis vinifera28.2933.8482.67202forward
CNT30319836Musa acuminataAsparagus officinalis23.3920.9385.63167forward
CNT3037127Musa acuminataCucumis melo17.6523.3884.92126forward
CNT30582028Musa acuminataEchinochloa crusgalli21.2921.3585.53152forward
CNT30117905Musa acuminataOryza nivara23.6714.6385.21169forward
CNT30604735Musa acuminataOryza punctata24.3720.6485.63174forward
CNT30334895Musa acuminataCynara cardunculus16.2528.582.76116forward
CNT30725414Musa acuminataLupinus angustifolius25.3520.3181.22181forward

Expression of CNT30586189

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MKKQHKEPSVCTCAMAAYRAKPQAASLTARADGPFGMLTTVRLQCV*

>peptide 2 (49 aa)
MAFRLKEQQVGFFCAEASRCTQQLALVWLSLGTQRPGSPCSASGGCLRT*

>peptide 3 (70 aa)
GVGEGDVPWVGALVHGVQVEGTAGGILLCRSFKVYSATCFGVAFSGHSAPGVTMLGFRRMPSNMTLFSAR*

Sequence

>CNT30586189
CTGGCGTAGGAGAAGGAGACGTGCCATGGGTTGGGGCCTTGGTTCATGGCGTTCAGGTTGAAGGAACAGCAGGTGGGATTCTTCTGTGCAGAAGCTTCAA
GGTGTACTCAGCAACTTGCTTTGGTGTGGCTTTCTCTGGGCACTCAGCGCCCGGGGTCACCATGCTCGGCTTCAGGAGGATGCCTTCGAACATGACGTTG
TTCTCGGCCAGGTAGAAGAAGACCTCAGCCCATACTTTCTGTGCAACCTCGAAGGTCCTCTCGATTCCGTGGTCTCCGTCAAGCAGGATTTCTGGCTCCA
CAATCGGCACCAACCCATTGTCCTGCAAACCCATTAGAAGAGAACTTGAGTATAAGATGAAGAAACAACACAAGGAACCGAGTGTGTGTACTTGTGCGAT
GGCAGCGTATCGAGCCAAGCCCCAGGCAGCTTCCTTGACTGCAAGAGCCGATGGGCCATTTGGAATGCTGACCACTGTACGCCTGCAATGTGTTTGATCA
AAGCGGGCACCCTGTTGATAGTATGCTGCGCATCGCGATGCCAGGCCGTCCAGTCCTTGGCACCATGATTCGTCATTTGAGCCAGTGAGTGGCACTAAAC
CCTGAGGAAAAGACAACATGGCGTCAAACACAGCCCTGCCCATCTCCTAGCAGACGACGTCACAGGAGCATTGGCACATGATTTAAGCGATTACCTTGTC
GACCTTGATCCCTG