Detailed information on CNT306434


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 2e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Zea maysOryza sativa98.4118.9288.31248forward
CNT30677085Zea maysSetaria viridis96.0346.7287.6242forward
CNT30640893Zea maysNymphaea colorata67.0618.7282.25169forward
CNT30518741Zea maysJuglans regia84.1342.7479.25212forward
CNT30374484Zea maysArabidopsis thaliana59.1335.0680.54149forward
CNT30405165Zea maysBeta vulgaris67.8632.6381.29171forward
CNT30297329Zea maysTriticum aestivum53.5757.9487.41135forward
CNT30223861Zea maysHordeum vulgare41.2718.3188.46104forward
CNT30390900Zea maysTriticum turgidum86.1131.3688.02217forward
CNT30586189Zea maysMusa acuminata84.1329.6983.96212forward
CNT30542943Zea maysBrassica napus65.0835.3479.88164forward
CNT30258087Zea maysAvena sativa79.3742.7489200forward
CNT30663719Zea maysTriticum dicoccoides50.7949.0486.72128forward
CNT30610790Zea maysGossypium raimondii88.8973.280.8224forward
CNT30216367Zea maysKalanchoe fedtschenkoi71.0349.4583.24179forward
CNT30207455Zea maysHelianthus annuus61.5123.4580.65155forward
CNT30348318Zea maysEragrostis tef94.8431.7887.03239forward
CNT30365623Zea maysSorghum bicolor91.6720.790.04231forward
CNT30597047Zea maysOryza meridionalis40.8710.690.29103forward
CNT30570332Zea maysVitis vinifera88.4937.3580.72223forward
CNT30104026Zea maysOryza rufipogon90.0825.7188.55227forward
CNT30117905Zea maysOryza nivara98.4121.4788.31248forward
CNT30604735Zea maysOryza punctata70.6321.1291.01178forward

Expression of CNT306434

Peptides detected in this lncRNA

>peptide 1 (83 aa)
RHGGRDPCAQEPEGVLGYLLRGGLLLALGTRGHHAGLQQDALEHHAVLGHVEEGLRPHLLRHLEGPLDAVLAIQKDLGLHDRHQ

>peptide 2 (50 aa)
GTAGGILVRRSLRVYSATCSGVAFSSHSAPGVTMLGFSRMPSNITLFSAM*

Sequence

>CNT306434
CGGCACGGCGGGAGGGATCCTTGTGCGCAGGAGCCTGAGGGTGTACTCGGCTACTTGCTCCGGGGTGGCCTTCTCCTCGCACTCGGCACCAGGGGTCACC
ATGCTGGGCTTCAGCAGGATGCCCTCGAACATCACGCTGTTCTCGGCCATGTAGAAGAAGGTCTCCGCCCACACCTTCTGCGCCACCTCGAAGGTCCTCT
CGATGCCGTGCTCGCCATCCAGAAGGATCTCGGGCTCCACGATCGGCACCAG