Detailed information on CNT30200362


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676912Pisum sativumSetaria viridis31.5417.7484.0988forward
CNT30524487Pisum sativumSetaria italica31.546.684.0988forward
CNT30640893Pisum sativumNymphaea colorata59.518.3881.33166forward
CNT30314796Pisum sativumCorylus avellana65.2326.4989.56182forward
CNT30518741Pisum sativumJuglans regia89.9650.684.86251forward
CNT30702712Pisum sativumQuercus lobata55.9118.6488.46156forward
CNT30377016Pisum sativumArabidopsis thaliana34.7726.6584.5497forward
CNT30273043Pisum sativumChenopodium quinoa91.0410.1882.68254forward
CNT30380779Pisum sativumManihot esculenta57.7125.8485.71161forward
CNT30405165Pisum sativumBeta vulgaris34.4118.3285.4296forward
CNT30710572Pisum sativumGlycine max93.9158.6188.93262forward
CNT30586189Pisum sativumMusa acuminata45.5217.7981.1127forward
CNT30541563Pisum sativumBrassica napus68.128.4983.68190forward
CNT30237267Pisum sativumBrassica oleracea70.6124.2984.77197forward
CNT3075755Pisum sativumBrassica juncea66.3127.1783.24185forward
CNT30263618Pisum sativumBrassica rapa68.8227.3184.9192forward
CNT30610790Pisum sativumGossypium raimondii88.5380.7283247forward
CNT30207455Pisum sativumHelianthus annuus34.4114.5287.596forward
CNT30128108Pisum sativumCorymbia citriodora36.9219.6983.5103forward
CNT30477126Pisum sativumArabidopsis halleri40.8628.2284.21114forward
CNT30620107Pisum sativumCajanus cajan62.0112.4591.33173forward
CNT30570332Pisum sativumVitis vinifera70.613385.28197forward
CNT3037127Pisum sativumCucumis melo64.8733.5882.87181forward
CNT30725414Pisum sativumLupinus angustifolius68.121.3290190forward

Expression of CNT30200362

Peptides detected in this lncRNA

>peptide 1 (92 aa)
HDTRDSRGNSPVKEIEGILGNFCRRGFVLRLSSWSNHARLEENTLKLYIVLSKVVENFSPNLLGYFKSSVNTVFSIKQDLWLHNWDQSIVLKN

Sequence

>CNT30200362
CATGATACCAGGGACAGCAGGGGGAATTCTCCTGTGAAGGAGATTGAGGGTATACTCGGCAACTTTTGTAGGAGAGGCTTTGTCCTTAGACTCAGCTCCT
GGAGTAACCATGCTAGGCTTGAGGAGAATACCCTCAAATTGTACATTGTTCTCAGCAAGGTAGTAGAAAACTTCAGCCCAAACCTTTTGGGCTACTTCAA
AAGTTCTGTCAATACCGTGTTCTCCATCAAGCAAGATCTCTGGCTCCACAATTGGGACCAATCCATTGTCCTAAAAAAT