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Detailed information on CNT30319836


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Asparagus officinalisOryza sativa20.812.6683.13166forward
CNT30676856Asparagus officinalisSetaria viridis23.3128.3181.18186forward
CNT30523899Asparagus officinalisSetaria italica15.2920.7181.15122forward
CNT30640893Asparagus officinalisNymphaea colorata22.0619.4981.25176forward
CNT30314796Asparagus officinalisCorylus avellana23.4327.2281.28187forward
CNT30518741Asparagus officinalisJuglans regia23.1837.379.46185forward
CNT30374484Asparagus officinalisArabidopsis thaliana18.0533.8883.33144forward
CNT30273043Asparagus officinalisChenopodium quinoa23.437.4979.14187forward
CNT30727836Asparagus officinalisCorchorus capsularis12.2826.3483.6798forward
CNT30381313Asparagus officinalisManihot esculenta16.5423.4584.09132forward
CNT30708950Asparagus officinalisGlycine max15.5432.1283.87124forward
CNT30390900Asparagus officinalisTriticum turgidum17.9220.6680.42143forward
CNT30586189Asparagus officinalisMusa acuminata20.9323.3985.63167forward
CNT30237267Asparagus officinalisBrassica oleracea21.320.9681.76170forward
CNT30145300Asparagus officinalisMedicago truncatula13.0347.7182.69104forward
CNT30439071Asparagus officinalisAegilops tauschii13.5332.3482.41108forward
CNT30258087Asparagus officinalisAvena sativa16.4227.9981.68131forward
CNT30664005Asparagus officinalisTriticum dicoccoides13.5324.2782.41108forward
CNT3075755Asparagus officinalisBrassica juncea19.4222.7681.94155forward
CNT30261343Asparagus officinalisBrassica rapa15.2923.0682.79122forward
CNT30610790Asparagus officinalisGossypium raimondii11.931.0586.3295forward
CNT30216367Asparagus officinalisKalanchoe fedtschenkoi22.9350.5580.87183forward
CNT30207455Asparagus officinalisHelianthus annuus18.4222.2485.03147forward
CNT30684371Asparagus officinalisTriticum urartu10.923.7183.9187forward
CNT30345063Asparagus officinalisEragrostis tef21.9363.6480.57175forward
CNT30479625Asparagus officinalisArabidopsis halleri12.6630.5184.16101forward
CNT30365786Asparagus officinalisSorghum bicolor15.2947.185.25122forward
CNT30570332Asparagus officinalisVitis vinifera21.9329.3180.57175forward
CNT3037127Asparagus officinalisCucumis melo22.5633.482.78180forward
CNT30104100Asparagus officinalisOryza rufipogon15.9123.2681.89127forward
CNT30117905Asparagus officinalisOryza nivara20.814.3783.13166forward
CNT30604735Asparagus officinalisOryza punctata20.5519.4582.32164forward
CNT30334895Asparagus officinalisCynara cardunculus20.5540.2981.71164forward
CNT30725414Asparagus officinalisLupinus angustifolius22.9320.5479.78183forward

Expression of CNT30319836

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MFMYFLYCQVRFVFFFVCKHDYCFKFLLKYLNYNES*

>peptide 2 (46 aa)
MYFEALSRRRKTRAMGSGSGSLHSAPGVTMLGFSRIPSNMTLFSAK*

>peptide 3 (36 aa)
MLGMITYYYWVLITVVYSHSFSTNTIGLHRRYFRYN*

>peptide 4 (52 aa)
GLGSYEQRILSGLHVLWPPSPSLQACILKRSRVGERHVPWVRALVHCIQLQA*

Sequence

>CNT30319836
TTGGCCTTGGCTCTTATGAGCAGCGCATCCTGAGCGGCCTTCACGTTCTCTGGCCTCCCTCCCCAAGTCTTCAAGCATGTATTTTGAAGCGCTCTCGCGT
AGGAGAAAGACACGTGCCATGGGTTCGGGCTCTGGTTCATTGCATTCAGCTCCAGGCGTGACCATGCTCGGCTTTAGTAGGATTCCTTCGAACATGACAT
TGTTCTCGGCTAAGTAAAAGAAGACCTCAGCCCACACTTTTTGTGCAATCTCGAAGGTTCTGTCGATTCCATGCTCACCGTCCAACAGTATCTCTGGCTC
GACTATTGGAACCAACCCGTTGTCCTGAAATCACATTGACATGAACAAATGATCGTTTTCCCCCTTTTTTTTCCTTATGCATCCATGATATTACTTATTA
TTACTATGTAATTATAACTGGATTACGAAAACAATTAACTGAGAAATTTTATTATATTTCAAGTAATTCCTTTTCCGCTAGCCTTCATATGTTTTTCTTC
TTTGTATGATAAATGCTTGGAATGATTACTTATTACTATTGGGTACTGATTACTGTTGTGTATAGTCATAGTTTCAGTACTAACACAATTGGTTTACATA
GACGATATTTCCGTTATAACTGACTTATGATGAATATTAACTGATATTTATGTGAATTTATCATGTTCATGTATTTTCTTTATTGTCAGGTTCGATTTGT
TTTCTTCTTCGTATGTAAGCATGATTACTGCTTTAAATTTTTGCTGAAATACTTGAATTATAATGAAAGCTAGCCAAGAAAAATTATGAAATTTACTT