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Detailed information on CNT30216367


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 4e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Kalanchoe fedtschenkoiOryza sativa51.6614.2687.17187forward
CNT30677085Kalanchoe fedtschenkoiSetaria viridis51.6636.185.03187forward
CNT30524487Kalanchoe fedtschenkoiSetaria italica47.2412.8285.38171forward
CNT30640893Kalanchoe fedtschenkoiNymphaea colorata37.5715.0683.09136forward
CNT30314796Kalanchoe fedtschenkoiCorylus avellana28.1814.8585.29102forward
CNT30518741Kalanchoe fedtschenkoiJuglans regia49.4536.0982.12179forward
CNT30273043Kalanchoe fedtschenkoiChenopodium quinoa49.177.1380.9178forward
CNT30381197Kalanchoe fedtschenkoiManihot esculenta30.1118.4783.49109forward
CNT30405165Kalanchoe fedtschenkoiBeta vulgaris35.3624.4382.03128forward
CNT30708796Kalanchoe fedtschenkoiGlycine max41.7131.5981.46151forward
CNT30297329Kalanchoe fedtschenkoiTriticum aestivum18.2328.3390.9166forward
CNT30390900Kalanchoe fedtschenkoiTriticum turgidum50.5526.4585.25183forward
CNT30586189Kalanchoe fedtschenkoiMusa acuminata47.7924.2384.39173forward
CNT30258087Kalanchoe fedtschenkoiAvena sativa50.5539.185.79183forward
CNT30663719Kalanchoe fedtschenkoiTriticum dicoccoides18.2325.2990.9166forward
CNT30139084Kalanchoe fedtschenkoiLolium perenne64.0927.6883.19232forward
CNT306434Kalanchoe fedtschenkoiZea mays49.4571.0383.24179forward
CNT30610790Kalanchoe fedtschenkoiGossypium raimondii43.6551.6382.28158forward
CNT3068263Kalanchoe fedtschenkoiLeersia perrieri41.7119.8486.09151forward
CNT30207455Kalanchoe fedtschenkoiHelianthus annuus25.6914.0786.0293forward
CNT30345063Kalanchoe fedtschenkoiEragrostis tef51.666883.96187forward
CNT30367502Kalanchoe fedtschenkoiSorghum bicolor28.1816.1186.27102forward
CNT30620107Kalanchoe fedtschenkoiCajanus cajan21.555.6184.6278forward
CNT30597047Kalanchoe fedtschenkoiOryza meridionalis29.2810.9187.74106forward
CNT30570331Kalanchoe fedtschenkoiVitis vinifera45.5827.9782.42165forward
CNT3029174Kalanchoe fedtschenkoiTheobroma cacao25.699.2783.8793forward
CNT30319836Kalanchoe fedtschenkoiAsparagus officinalis50.5522.9380.87183forward
CNT3037127Kalanchoe fedtschenkoiCucumis melo25.4117.0784.7892forward
CNT30104026Kalanchoe fedtschenkoiOryza rufipogon43.9218.0186.16159forward
CNT30582028Kalanchoe fedtschenkoiEchinochloa crusgalli45.5823.1784.85165forward
CNT30117905Kalanchoe fedtschenkoiOryza nivara51.6616.1987.17187forward
CNT30604735Kalanchoe fedtschenkoiOryza punctata49.4521.2386.03179forward
CNT30334895Kalanchoe fedtschenkoiCynara cardunculus49.4543.9881.56179forward
CNT30724556Kalanchoe fedtschenkoiLupinus angustifolius21.82884.8179forward

Expression of CNT30216367

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MPCSPSSRISGSTIGTSPLAYHLAKRAPCW*

>peptide 2 (46 aa)
GTRLRRRSRVYLATWLGVARSLHSAPGVTMLGLRRMPSNRTLFCAR*

>peptide 3 (96 aa)
DTPAEEVESVLGDLVGRGAVLALGSRGDHAGLEEDALEQDLVLREVEEDLGPHRLSHLEGPVDAVLSVEQDLRLDNRDQPVGVPLGEASALLVVSG*

Sequence

>CNT30216367
GGGACACGCCTGCGGAGGAGGTCGAGAGTGTACTTGGCGACCTGGTTGGGCGTGGCGCGGTCCTTGCACTCGGCTCCCGGGGTGACCATGCTGGGCTTGA
GGAGGATGCCCTCGAACAGGACCTTGTTCTGCGCGAGGTAGAAGAAGACCTCGGCCCACACCGCTTGAGCCACCTCGAAGGTCCTGTCGATGCCGTGCTC
TCCGTCGAGCAGGATCTCCGGCTCGACAATCGGGACCAGCCCGTTGGCGTACCACTTGGCGAAGCGAGCGCCTTGCTGGTAGTAAGCGGCTGAGCGCGAG
GCGAGTCCGTCGAGTCCTTGGCACCAGGACTCGTCGTTGGAGCCCGCAAGCGGCACCAGTCC