« Back to Corchorus capsularis search


Detailed information on CNT30727836


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 6e-42

BLAST vs NONCODE:
NONMEST001145, E-value = 4e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677406Corchorus capsularisSetaria viridis41.427.1182.47154forward
CNT30524374Corchorus capsularisSetaria italica30.9111.6481.74115forward
CNT30640893Corchorus capsularisNymphaea colorata41.6717.1786.45155forward
CNT30314796Corchorus capsularisCorylus avellana47.5825.7684.18177forward
CNT30702712Corchorus capsularisQuercus lobata58.0625.8186.11216forward
CNT30269395Corchorus capsularisChenopodium quinoa24.192.983.3390forward
CNT30381342Corchorus capsularisManihot esculenta58.8727.186.76219forward
CNT30494492Corchorus capsularisOlea europaea35.2226.0484.73131forward
CNT30708916Corchorus capsularisGlycine max50.5478.0185.11188forward
CNT30145300Corchorus capsularisMedicago truncatula35.4860.5589.39132forward
CNT30462400Corchorus capsularisSaccharum spontaneum58.8716.0981.74219forward
CNT30610723Corchorus capsularisGossypium raimondii58.8742.4490.41219forward
CNT30207455Corchorus capsularisHelianthus annuus40.862383.55152forward
CNT30128108Corchorus capsularisCorymbia citriodora25.8118.3687.596forward
CNT30345069Corchorus capsularisEragrostis tef59.4138.0482.35221forward
CNT30479625Corchorus capsularisArabidopsis halleri19.0921.4587.3271forward
CNT30365786Corchorus capsularisSorghum bicolor41.459.4682.47154forward
CNT30620107Corchorus capsularisCajanus cajan58.0615.5487.5216forward
CNT30481517Corchorus capsularisChara braunii33.641.3981.6125forward
CNT30570331Corchorus capsularisVitis vinifera45.4328.6485.21169forward
CNT30319836Corchorus capsularisAsparagus officinalis26.3412.2883.6798forward
CNT3037147Corchorus capsularisCucumis melo47.8524.6283.71178forward
CNT30104026Corchorus capsularisOryza rufipogon41.6717.5581.94155forward
CNT30582099Corchorus capsularisEchinochloa crusgalli26.081882.4797forward
CNT30557232Corchorus capsularisPanicum hallii41.423.1680.52154forward
CNT30334895Corchorus capsularisCynara cardunculus37.3734.1585.61139forward
CNT30725421Corchorus capsularisLupinus angustifolius28.7614.6288.79107forward

Expression of CNT30727836

Sequence

>CNT30727836
CCAAGGTAAATTGCAGTATCCTTATACCAAACAGTTTTGATCAGAATCATGCATGATGAGAAATAGATCATTCAGAAATTATCAGAGGGTGAATTTGAAG
CTGATCATCAAAATGCAGATTCAAGCATTTTAGTATGTGATCATGCAAACATAGTGTATTTGCCAAGCTGAGCAAGGGAGTTGGCCTTGGCACGGAGAAG
AAGTGCGTCCTGGGCGGCCTTAACATTCTCGGGTCTGCCTCCCCATGTCTTCAAGCAAGTGTTCTGGAGAGCTCTAGCGTACGAGAAGGAGACGTGCCAT
GGGTTGGCAGATTGGTTCATTGCATTCAAGTTGAGGGTTGCTTCAACCTCAGATTGCCCACCAGACAAGAAC