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Detailed information on CNT3037127


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01516|ALFC1_PEA, E-value = 2e-72

BLAST vs NONCODE:
NONMEST001145, E-value = 3e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677406Cucumis meloSetaria viridis36.7334.8680.81198forward
CNT30524487Cucumis meloSetaria italica26.7210.7980.56144forward
CNT30314796Cucumis meloCorylus avellana33.426.282.22180forward
CNT30518741Cucumis meloJuglans regia32.6535.4881.82176forward
CNT30405165Cucumis meloBeta vulgaris25.7926.5382.73139forward
CNT30526822Cucumis meloPhaseolus vulgaris33.2136.0982.68179forward
CNT30200362Cucumis meloPisum sativum33.5864.8782.87181forward
CNT30710572Cucumis meloGlycine max39.747.8783.64214forward
CNT30390900Cucumis meloTriticum turgidum30.823.9980.72166forward
CNT30586189Cucumis meloMusa acuminata23.3817.6584.92126forward
CNT30541563Cucumis meloBrassica napus32.6526.3980.11176forward
CNT30237267Cucumis meloBrassica oleracea32.8421.8282.49177forward
CNT30258087Cucumis meloAvena sativa35.4440.8179.58191forward
CNT3075755Cucumis meloBrassica juncea31.7325.1180.12171forward
CNT30261343Cucumis meloBrassica rapa43.0443.8680.17232forward
CNT30610790Cucumis meloGossypium raimondii30.9854.5883.83167forward
CNT30216367Cucumis meloKalanchoe fedtschenkoi17.0725.4184.7892forward
CNT30207455Cucumis meloHelianthus annuus30.2424.6682.82163forward
CNT30479625Cucumis meloArabidopsis halleri13.1721.4585.9271forward
CNT30570332Cucumis meloVitis vinifera36.1832.6684.1195forward
CNT30319836Cucumis meloAsparagus officinalis33.422.5682.78180forward
CNT30604735Cucumis meloOryza punctata22.0814.1284.03119forward
CNT30334895Cucumis meloCynara cardunculus30.4340.2981.71164forward
CNT30725414Cucumis meloLupinus angustifolius33.420.282.22180forward

Expression of CNT3037127

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MRRTHAMGLVLGSWDSSLEKRKSVLSNCLRACFVFALSSRSNHAWFQKNSFKQNIVLCKVEEDLCPNFLCYLEGSVNPVLTVKQDLRLDDWNQSIV

>peptide 2 (55 aa)
MPWVWCLVHGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR*

Sequence

>CNT3037127
CTCCAACTTCAACCATCATCATCTTCTTCTTCTTTTTTCATCTTCTTGATCTATAGAAAAGCTTAGTATGTGTAGCCCTTGACAAACATTCCCTCCTTTG
CTTCGTCAGACTCACCGTCACCAGTGTACTTCCCAAGCTGGGCGAGGGAGTTCGACTTGGCTCGTTGAATCAGAGCATCCTGTGCGGCCTTCACATTCTC
TGGTCGTCCACCCCATGTCTTCAAGCAAGTGTTTTGGAGAGCTCTAGCATATGAGAAGGACACATGCCATGGGTTTGGTGCTTGGTTCATGGGATTCTTC
TTTGGAGAAGAGAAAGAGTGTACTTAGCAACTGTCTCAGGGCTTGCTTTGTCTTTGCTCTCAGCTCCAGGAGTAACCATGCTTGGTTTCAAAAGAATTCC
TTCAAACAAAACATTGTTCTCTGCAAGGTAGAAGAAGACCTCTGCCCAAACTTTCTGTGCTACCTCGAAGGTTCTGTCAATCCCGTGCTCACCGTCAAGC
AAGATCTCCGGCTCGACGATTGGAACCAATCCATTGTCC