Detailed information on CNT30392715


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640893Triticum turgidumNymphaea colorata46.7511.9688.89108forward
CNT30374484Triticum turgidumArabidopsis thaliana25.1113.6591.3858forward
CNT30295969Triticum turgidumTriticum aestivum100100100231forward
CNT30663719Triticum turgidumTriticum dicoccoides10088.51100231forward
CNT30207455Triticum turgidumHelianthus annuus28.149.8390.7765forward
CNT30597047Triticum turgidumOryza meridionalis73.1617.3990.53169forward
CNT30117945Triticum turgidumOryza nivara77.4920.4390.5179forward

Expression of CNT30392715

Peptides detected in this lncRNA

>peptide 1 (75 aa)
GDGRGDPSLEKLEGVAGYFLRGGPVLALGTRGHHAWLQEDALKHDVVLGHIVEGPLDAVLTVEHDLRLHNRHQPIV

Sequence

>CNT30392715
CGGGGACGGAAGGGGGGATCCTTCTCTGGAGAAGCTTGAGGGTGTAGCTGGCTACTTCCTCAGGGGTGGCCCTGTCCTTGCACTCGGCACCAGGGGTCAC
CATGCTTGGCTTCAAGAGGATGCCCTCAAACATGACGTTGTTCTGGGCCATATAGTAGAAGGTCCTCTCGATGCCGTGCTCACCGTCGAGCATGATCTCA
GGCTCCACAATCGGCACCAGCCCATTGTCCT