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Detailed information on CNT30145300


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01517|ALFC2_PEA, E-value = 1e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640893Medicago truncatulaNymphaea colorata29.367.0987.564forward
CNT30314796Medicago truncatulaCorylus avellana70.1822.2783.01153forward
CNT30702712Medicago truncatulaQuercus lobata94.0424.4985.37205forward
CNT30727836Medicago truncatulaCorchorus capsularis60.5535.4889.39132forward
CNT30381342Medicago truncatulaManihot esculenta47.7112.8791.35104forward
CNT30526822Medicago truncatulaPhaseolus vulgaris64.2228.2382.86140forward
CNT30494492Medicago truncatulaOlea europaea61.9326.8483.7135forward
CNT30708916Medicago truncatulaGlycine max88.5380.0887.56193forward
CNT30171644Medicago truncatulaTrifolium pratense31.6512.8597.169forward
CNT30263633Medicago truncatulaBrassica rapa20.187.3690.9144forward
CNT30610723Medicago truncatulaGossypium raimondii88.0737.2184.9192forward
CNT30207455Medicago truncatulaHelianthus annuus44.514.6787.6397forward
CNT30128108Medicago truncatulaCorymbia citriodora42.217.5992.3992forward
CNT30479625Medicago truncatulaArabidopsis halleri20.1813.2990.9144forward
CNT30620107Medicago truncatulaCajanus cajan93.5814.6890.2204forward
CNT30481517Medicago truncatulaChara braunii35.3225.585.7177forward
CNT30570331Medicago truncatulaVitis vinifera26.619.8393.158forward
CNT30319836Medicago truncatulaAsparagus officinalis47.7113.0382.69104forward
CNT3037147Medicago truncatulaCucumis melo41.2812.4587.7890forward
CNT30334895Medicago truncatulaCynara cardunculus61.9333.1783.7135forward
CNT30725421Medicago truncatulaLupinus angustifolius45.8713.6694100forward

Expression of CNT30145300

Peptides detected in this lncRNA

>peptide 1 (59 aa)
RTTSIEQLSWTWRGKEALLELPSRSLRGLPMSSMRYFGELLRMRTTRAMGLEIGSWHSS*

Sequence

>CNT30145300
AGGACAACTTCGATTGAGCAATTGAGTTGGACTTGGCGCGGAAAAGAAGCGCTTCTTGAGCTGCCTTCACGTTCTCTACGCGGCCTCCCCATGTCTTCAA
TGCGGTATTTTGGAGAGCTCTTGCGTATGAGAACGACACGTGCCATGGGTTTGGAGATTGGTTCATGGCATTCAAGTTGAGGGTTGCTTCAACCTCAGAT
TGTCCACCAGACAAAAAC