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Detailed information on CNT30710704


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01516|ALFC1_PEA, E-value = 3e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677085Glycine maxSetaria viridis30.2145.3779.57235forward
CNT30640893Glycine maxNymphaea colorata29.0525.0382.74226forward
CNT30518741Glycine maxJuglans regia29.8246.7787.07232forward
CNT30702585Glycine maxQuercus lobata14.7849.7890.43115forward
CNT30390900Glycine maxTriticum turgidum24.8127.8978.76193forward
CNT30541563Glycine maxBrassica napus23.3927.2981.87182forward
CNT30237267Glycine maxBrassica oleracea23.6522.6982.61184forward
CNT30171644Glycine maxTrifolium pratense15.0421.7984.62117forward
CNT30258087Glycine maxAvena sativa25.3242.0979.7197forward
CNT30263618Glycine maxBrassica rapa23.6526.1782.07184forward
CNT30207455Glycine maxHelianthus annuus23.1427.2380.56180forward
CNT30345065Glycine maxEragrostis tef28.5345.480.18222forward
CNT30570332Glycine maxVitis vinifera25.4533.1786.36198forward
CNT30725414Glycine maxLupinus angustifolius47.5641.5385.68370forward

Expression of CNT30710704

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MRVHLVLPSRSLGGLPMSSRQCFGGLWHTRMTRATGA*

>peptide 2 (32 aa)
MLPIKQDLWLHNWDQPIVLKPLNENILALQNQ*

Sequence

>CNT30710704
ATAATCAAGTACACAACTCATAGCAAAAGGTTTATTAAGCTGTAAAGGTGCATTTAACCATAAACAAAAATAGTCTCCAAGACTATAAAAACATTACATT
TTAGACAAATTAGTCTTCCACTTCATCGTCCGTCAACACCTACTGTAACTGCTGGTGTTGCTGCCTAACAAGTATCATATTCACTGCAAACATCTTAGTA
GGAGTAGCTTTTGACGAACAACTCCTTCTTGGCTTCCTCGGATTCACCCTCACCAGTGTACTTCCCAAGCTGAGCGAGTGAGTTGGACTTGGCACGGAAT
GCGAGTGCATCTTGTGCTGCCTTCACGTTCTCTGGGCGGCCTCCCCATGTCTTCAAGGCAGTGTTTTGGAGGGCTCTGGCATACGAGAATGACACGTGCC
ACGGGAGCTTGAGGGTGTAATCAGCAACTGTCTGAGGACTGGCCTTGTCCTTGGACTCGGCTCCAGGTGTAACCATGCTAGGCTTAAGGAGAATACCCTC
AAAAAGGACATTGTTCTCAGCAAGGTAGAAGAAAACCTCTGCCCAGACCTTTTGGGCTACTTCAAAAGTTCTATCAATACCATGCTCCCCATCAAGCAAG
ATCTCTGGCTCCACAATTGGGACCAACCCATTGTCCTAAAACCATTAAATGAAAACATTTTGGCACTTCAGAATCAGTAGAAAAATATAGGTGCTCTTCC
TAGGTGTATATCACATCTATAAATAGAAGTGTAACTCTAACAAAAAACGAAATCACTAATCTAACTTGAGTGGTTTTC