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Detailed information on CNT30352420

BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 2e-78

BLAST vs NONCODE:
NONSLYT002404, E-value = 6e-59

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30695840	Eragrostis tef	Oryza sativa	27.14	24.42	93.45	168	forward
CNT30675663	Eragrostis tef	Setaria viridis	52.02	69.25	90.68	322	forward
CNT30378101	Eragrostis tef	Arabidopsis thaliana	49.27	34.58	83.28	305	forward
CNT30282434	Eragrostis tef	Chenopodium quinoa	53.63	13.52	83.43	332	forward
CNT30381504	Eragrostis tef	Manihot esculenta	38.45	27.77	80.67	238	forward
CNT30402836	Eragrostis tef	Beta vulgaris	29.89	19.15	82.16	185	forward
CNT30630919	Eragrostis tef	Vigna unguiculata	61.87	28.75	82.25	383	forward
CNT30712266	Eragrostis tef	Glycine max	16.8	37.96	88.46	104	forward
CNT30635894	Eragrostis tef	Capsicum annuum	37.8	41.56	83.76	234	forward
CNT3094731	Eragrostis tef	Solanum tuberosum	44.1	18.19	82.42	273	forward
CNT30187559	Eragrostis tef	Secale cereale	36.35	33.73	88.89	225	forward
CNT30298345	Eragrostis tef	Triticum aestivum	52.02	45.74	89.75	322	forward
CNT30224390	Eragrostis tef	Hordeum vulgare	28.43	32	86.36	176	forward
CNT30394033	Eragrostis tef	Triticum turgidum	52.02	23.8	89.75	322	forward
CNT30560520	Eragrostis tef	Actinidia chinensis	32.31	63.09	81	200	forward
CNT30510308	Eragrostis tef	Solanum lycopersicum	27.63	66.28	84.8	171	forward
CNT30554643	Eragrostis tef	Oryza glaberrima	25.04	32.63	94.19	155	forward
CNT30441217	Eragrostis tef	Aegilops tauschii	67.53	56.26	88.52	418	forward
CNT30250601	Eragrostis tef	Avena sativa	24.39	35.53	90.73	151	forward
CNT30665102	Eragrostis tef	Triticum dicoccoides	24.56	36.71	88.16	152	forward
CNT30314068	Eragrostis tef	Camelina sativa	72.54	29.62	80.85	449	forward
CNT304322	Eragrostis tef	Zea mays	43.62	47.29	88.89	270	forward
CNT30227528	Eragrostis tef	Ananas comosus	41.52	35.35	86.38	257	forward
CNT30126131	Eragrostis tef	Corymbia citriodora	24.88	26.92	82.47	154	forward
CNT30625469	Eragrostis tef	Daucus carota	73.83	30.55	79.21	457	forward
CNT30721901	Eragrostis tef	Triticum spelta	28.27	34.31	86.86	175	forward
CNT30477326	Eragrostis tef	Arabidopsis halleri	35.7	25	82.81	221	forward
CNT30362691	Eragrostis tef	Sorghum bicolor	42	26.29	88.08	260	forward
CNT30371090	Eragrostis tef	Oryza glumipatula	16.16	20.75	96	100	forward
CNT30481150	Eragrostis tef	Chara braunii	64.3	28.17	78.64	398	forward
CNT30704690	Eragrostis tef	Prunus avium	73.83	22.49	82.49	457	forward
CNT3055965	Eragrostis tef	Amborella trichopoda	34.73	24.74	86.51	215	forward
CNT30107297	Eragrostis tef	Oryza longistaminata	25.04	34.52	89.03	155	forward
CNT30323609	Eragrostis tef	Asparagus officinalis	73.83	27.45	87.53	457	forward
CNT30149846	Eragrostis tef	Brachypodium distachyon	26.01	36.34	90.06	161	forward
CNT30103353	Eragrostis tef	Oryza rufipogon	94.83	58.47	90.29	587	forward
CNT30577638	Eragrostis tef	Oryza barthii	53.96	51.54	89.22	334	forward
CNT30584451	Eragrostis tef	Echinochloa crusgalli	47.66	55.04	92.54	295	forward
CNT30594767	Eragrostis tef	Eragrostis curvula	14.54	34.88	95.56	90	forward

Expression of CNT30352420

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MSVSASAVSSSSMLRPSLSMRWRRLPKVLGSSRLKPEVRSAVSNSSITRSLTDLSFLSASARLRSSSMMAFSGLISIVFLLDM*

>peptide 2 (47 aa)
RITSFLSRACKALSRPPPSCSRRRRPPAAACRCQPQQSRPRRCSGPA*

>peptide 3 (89 aa)
MLESLSAWAFMILSMLAVQPYSPVTRQHGESTTRSETTTFSTLSPSTSLMTLQRPSNFSFSSSFLFFSSSLSSSFRPSLVAETSFLPSKS

Sequence

>CNT30352420
CGAATAACTAGCTTCCTAAGTCGGGCATGCAAGGCGCTTAGTCGACCTCCTCCATCTTGCTCTCGCCGGCGTCGTCCTCCAGCGGCGGCATGTCGGTGTC
AGCCTCAGCAGTCTCGTCCTCGTCGATGCTCAGGCCCAGCTTGAGCATGCGGTGGAGGCGGCTGCCAAAGGTGTTGGGGTCGTCGAGGCTGAAGCCGGAG
GTGAGGAGCGCCGTCTCGAACAGCAGCATCACGAGGTCCTTGACCGACTTGTCGTTCTTGTCAGCCTCCGCGCGCTTGCGCAGCTCGTCCATGATGGCGT
TCTCGGGGTTGATCTCCATCGTCTTCTTGCTTGACATGTAGCCGGACATGCTGGAGTCCCTGAGCGCCTGGGCCTTCATGATCCTCTCCATGTTGGCGGT
CCAGCCGTACTCGCCGGTGACGAGGCAGCACGGGGAGTCCACCACACGGTCAGAGACCACCACCTTCTCGACCTTGTCGCCGAGCACCTCCTTGATGACC
TTGCAGAGGCCCTCGAACTTCTCCTTCAGCTCCTCCTTCCTCTTCTTCTCGTCTTCACTTTCATCAAGCTTCAGGCCCTCCTTGGTGGCAGAGACGAGCT
TCTTGCCCTCAAAATCCTT