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Detailed information on CNT30298345


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 2e-76

BLAST vs NONCODE:
NONSLYT002404, E-value = 8e-111

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695840Triticum aestivumOryza sativa19.620.0688.41138forward
CNT30282434Triticum aestivumChenopodium quinoa56.5316.2186.68398forward
CNT3019970Triticum aestivumCitrullus lanatus33.2476.9782.48234forward
CNT30630919Triticum aestivumVigna unguiculata65.6234.6883.55462forward
CNT30712266Triticum aestivumGlycine max20.4552.5588.89144forward
CNT30635894Triticum aestivumCapsicum annuum18.6123.2787.79131forward
CNT30187559Triticum aestivumSecale cereale24.4325.7997.67172forward
CNT30394033Triticum aestivumTriticum turgidum101.752.9298.18716forward
CNT30510227Triticum aestivumSolanum lycopersicum29.2617.5983.5206forward
CNT30441217Triticum aestivumAegilops tauschii35.9434.0597.23253forward
CNT30665102Triticum aestivumTriticum dicoccoides37.2263.2995.04262forward
CNT304322Triticum aestivumZea mays35.9444.3189.72253forward
CNT30227528Triticum aestivumAnanas comosus22.1621.4689.74156forward
CNT30126131Triticum aestivumCorymbia citriodora21.7326.7583.01153forward
CNT30625276Triticum aestivumDaucus carota64.232.1582.3452forward
CNT30352420Triticum aestivumEragrostis tef45.7452.0289.75322forward
CNT30103353Triticum aestivumOryza rufipogon64.245.0290.71452forward
CNT30577638Triticum aestivumOryza barthii34.0937.0490.42240forward

Expression of CNT30298345

Peptides detected in this lncRNA

>peptide 1 (92 aa)
MLESLKAWAFMILSMLAVHPYSPVTRQQGESTTRSETMTFSTLSPSTSLMTLHSPSNFSLSSSCFFFSSSLSSSFRPSLVAETSFLPSNSLS*

>peptide 2 (49 aa)
YNRTNNNELFHEYHKQLAALNVWPAKRQNRYSDHPTSTLKIKTTRRCRA*

>peptide 3 (35 aa)
MNIRRQADLALSRPPPSCSHQRRPPGAACRCRSQG*

Sequence

>CNT30298345
ATATAATAGAACCAACAATAACGAACTGTTCCACGAGTACCACAAACAGCTAGCCGCGCTTAATGTTTGGCCAGCCAAAAGACAAAACCGATACAGCGAC
CATCCAACGTCGACACTAAAGATAAAAACAACTAGGCGGTGCAGGGCATGAACATCCGACGACAGGCAGACTTGGCGCTTAGTCGACCTCCTCCATCTTG
CTCTCACCAGCGTCGTCCTCCAGGGGCGGCATGTCGGTGTCGTTCTCAGGGTTGATCTCCATGGTCTTCTTGCTTGACATGTAGCCAGCCATGCTCGAGT
CCCTCAAGGCCTGGGCCTTCATGATCCTCTCCATGTTGGCGGTCCACCCATACTCGCCAGTCACCAGACAGCAAGGGGAGTCCACAACACGGTCAGAGAC
GATGACCTTCTCCACCTTGTCGCCCAGCACCTCCTTGATGACCTTGCACAGCCCCTCGAACTTCTCCTTGAGCTCCTCCTGCTTCTTCTTCTCGTCCTCG
CTCTCATCGAGCTTCAGACCCTCCTTGGTGGCAGAGACAAGCTTCTTGCCCTCAAACTCCTTGAGCTGACCAATGGCATACTCATCAATGGCGTCAACCA
TGTAGATGACCTCATAGCCCTTCTTCTTCAGCTTCTCAAGGAAGGGAGAGTTCTCCACAGCCTTCTTGCTCTCACCGGTGATGTAGTAGATCTCGTTCTG
TCCC