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Detailed information on CNT3094731


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 0.0

BLAST vs NONCODE:
NONSLYT002404, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Solanum tuberosumOryza sativa9.7336.4183.56146forward
CNT30675624Solanum tuberosumSetaria viridis16.7939.9484.92252forward
CNT30523385Solanum tuberosumSetaria italica13.9227.4384.69209forward
CNT30512942Solanum tuberosumJuglans regia21.1962.7284.59318forward
CNT30282434Solanum tuberosumChenopodium quinoa23.2514.2285.1349forward
CNT3019808Solanum tuberosumCitrullus lanatus18.9942.5487.37285forward
CNT30729348Solanum tuberosumCorchorus capsularis12.1320.1186.81182forward
CNT30381504Solanum tuberosumManihot esculenta31.5855.3184.81474forward
CNT30402788Solanum tuberosumBeta vulgaris23.2527.7483.67349forward
CNT30631057Solanum tuberosumVigna unguiculata33.0458.2884.68496forward
CNT30712364Solanum tuberosumGlycine max20.2576.5783.88304forward
CNT30187977Solanum tuberosumSecale cereale18.2537.9587.59274forward
CNT30298225Solanum tuberosumTriticum aestivum28.2555.4285.85424forward
CNT30394033Solanum tuberosumTriticum turgidum33.1836.8185.74498forward
CNT30566784Solanum tuberosumActinidia chinensis21.1241.7185.8317forward
CNT30510227Solanum tuberosumSolanum lycopersicum29.653893.93445forward
CNT30554909Solanum tuberosumOryza glaberrima12.9950.6582.56195forward
CNT30145670Solanum tuberosumMedicago truncatula11.9343.9887.15179forward
CNT30441217Solanum tuberosumAegilops tauschii13.6627.5984.88205forward
CNT3061941Solanum tuberosumArabidopsis lyrata6.638.0889.999forward
CNT30613762Solanum tuberosumArabis alpina20.1275.586.75302forward
CNT304322Solanum tuberosumZea mays12.1932.0585.25183forward
CNT30606420Solanum tuberosumGossypium raimondii18.1947.8186.08273forward
CNT30652959Solanum tuberosumRosa chinensis13.9243.4586.6209forward
CNT30212676Solanum tuberosumHelianthus annuus8.5936.3487.6129forward
CNT30625276Solanum tuberosumDaucus carota54.4358.1182.13817forward
CNT30688537Solanum tuberosumTriticum urartu532.479275forward
CNT30352420Solanum tuberosumEragrostis tef18.1944.182.42273forward
CNT30477326Solanum tuberosumArabidopsis halleri28.5148.4285.75428forward
CNT30362636Solanum tuberosumSorghum bicolor19.1930.8784.38288forward
CNT30154320Solanum tuberosumPrunus persica5.5322.4986.7583forward
CNT30418103Solanum tuberosumPapaver somniferum13.9253.5989209forward
CNT30704690Solanum tuberosumPrunus avium32.2523.8286.16484forward
CNT3022206Solanum tuberosumPopulus trichocarpa20.5256.6286.36308forward
CNT30323609Solanum tuberosumAsparagus officinalis34.6431.2382.88520forward
CNT30103353Solanum tuberosumOryza rufipogon27.5841.2486.23414forward
CNT30577638Solanum tuberosumOryza barthii12.9229.9486.08194forward
CNT30551470Solanum tuberosumOryza brachyantha20.9272.1885.03314forward
CNT30113681Solanum tuberosumFicus carica17.9236.9582.53269forward
CNT30724273Solanum tuberosumLupinus angustifolius10.8628.384.05163forward

Expression of CNT3094731

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLFPIISQALVESSILFLCDLFWLPHPNGLLLVHQ*

>peptide 2 (32 aa)
MNSECFLIRSLSLRSSRFSPDVSLVTVKEPPA*

>peptide 3 (36 aa)
QMQACRHQHLRFPHQCSNRVSASCEFCCQRCLAPQG*

>peptide 4 (39 aa)
LKCRHVGISISAFLINAQTEFQHPVNSVAKGVWLLKAET*

>peptide 5 (48 aa)
MMDHARVPKCLCLHDSLHVSGPAILTSHQTAGRVHNTVRNNNLFNFVS*

>peptide 6 (58 aa)
MINTRRTYSLILLGFFFVSKRSKGALFGTKRTALNSNWPSTEKCFTARCSSQSLVKLL*

>peptide 7 (63 aa)
MGFCLFTSDHSLETSLTFFFFFSSFSLSSSTSSTFPSSSFFSSSSSSSEISFSMVFSTQREIG*

>peptide 8 (92 aa)
MLESLSACAFMILSMLAVQPYSPVTKQQGESTTRSETITFSTLSPSTSFITLHSPSNFSFNSSCFFFSSSLSSSLRPSLVAETSFLPSNSFS*

Sequence

>CNT3094731
CTCAAATGCAGGCATGTCGGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGC
TCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCC
TCAGCTCATCCATGATGGACCATGCTAGAGTCCCTAAGTGCCTGTGCCTTCATGATTCTCTCCATGTTAGCGGTCCAGCCATACTCACCAGTCACCAAAC
AGCAGGGAGAGTCCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTT
CAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGA
CCAATGGAGTACTCATCAATGGCATCAACCATGTAAAGTACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGC
TCTCACCAGTAATGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTTACATAGTCTTTCAAGCTGGTCATCTCATCACCACTCTTGGTGGAATGGTA
CCTCAGCAGTTCAGCAAACTTTGACCTGTCCTCAGAATCCACAATACCCTTCACAAAGCTCAAATATTCAGGAATCAACTCCTCACAGTTATCCATGATA
AACACACGGCGAACATACAGCTTGATATTGTTGGGCTTCTTCTTTGTGTCAAAGAGGTCAAAAGGAGCCCTTTTTGGAACAAAAAGGACAGCCTTGAACT
CCAACTGGCCCTCAACAGAGAAGTGCTTCACAGCAAGATGCTCTTCCCAATCATTAGTCAAGCTCTTGTAGAAAGCAGCATACTCTTCCTTTGTGATCTC
TTCTGGCTTCCTCATCCAAATGGGCTTCTGCTTGTTCACCAGTGACCACTCATTAGAAACTTCCTTAACCTTCTTCTTTTTCTTCTCTTCCTTCTCCTTA
TCCTCATCGACCTCCTCTACCTTTCCCTCCTCATCTTTCTTCTCCTCTTCCTCCTCATCATCAGAAATTTCCTTCTCTATGGTCTTCTCAACCCAAAGAG
AGATAGGGTAGCTAATGAACTCAGAGTGCTTCTTAATAAGGTCCTTGAGCCTACGTTCTTCAAGGTTCTCACCAGATGTATCCCTGGTAACAGTGAAAGA
GCCACCGGCTTGAGACTCCCAGACATACTGTTCATCATCATTGTGCTTTGTGGTCACAATAACCTTCTCAGCTACCAAGTAAGCAGAGTAGAAACCAACA
CCAAATTGACCAATCATGCTAACATCAGCACCAGCTGCAATAGCTTCCATGAACTCCTTGGTTCCTGACCTTGCAATTGTACCCAGGTTATTCACCAGAT
C