Detailed information on CNT30481150


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 1e-121

BLAST vs NONCODE:
NONSLYT002404, E-value = 2e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675843Chara brauniiSetaria viridis7.3624.789.42104forward
CNT30378101Chara brauniiArabidopsis thaliana34.7555.6780.24491forward
CNT30282434Chara brauniiChenopodium quinoa21.9412.6378.71310forward
CNT3019970Chara brauniiCitrullus lanatus12.6758.8880.45179forward
CNT30381504Chara brauniiManihot esculenta15.1524.9780.37214forward
CNT30402788Chara brauniiBeta vulgaris28.131.5680.6397forward
CNT30526202Chara brauniiPhaseolus vulgaris5.0231.8485.9271forward
CNT30712266Chara brauniiGlycine max9.3448.1881.82132forward
CNT30298225Chara brauniiTriticum aestivum28.5952.8181.68404forward
CNT30394033Chara brauniiTriticum turgidum38.1539.8480.52539forward
CNT30562110Chara brauniiActinidia chinensis13.5223.1279.58191forward
CNT30441217Chara brauniiAegilops tauschii13.2325.1779.68187forward
CNT30314068Chara brauniiCamelina sativa38.7836.1578.83548forward
CNT304322Chara brauniiZea mays14.7936.678.95209forward
CNT30126131Chara brauniiCorymbia citriodora9.0622.3882.03128forward
CNT30352420Chara brauniiEragrostis tef28.1764.378.64398forward
CNT30477326Chara brauniiArabidopsis halleri26.4742.3181.28374forward
CNT30362636Chara brauniiSorghum bicolor18.2627.6585.66258forward
CNT30704690Chara brauniiPrunus avium37.325.9478.75527forward
CNT30323609Chara brauniiAsparagus officinalis36.5931.0578.92517forward
CNT30149846Chara brauniiBrachypodium distachyon9.0628.8980.47128forward
CNT30103353Chara brauniiOryza rufipogon31.4244.2282.21444forward
CNT30577638Chara brauniiOryza barthii1532.7283.49212forward
CNT30724231Chara brauniiLupinus angustifolius4.9528.2387.1470forward

Expression of CNT30481150

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MASPQYGPRRRPSQPYHRGSPSSTCTGFQTPF*

>peptide 2 (45 aa)
MRQDNKRKKVARTRQSLTIEDKEESSARETTHSKKLAPNDYQKDI*

>peptide 3 (98 aa)
MIRSMFAVQPYSPVTRQHGESTIRSETTTFSTLSPRISFINLHRLSNSFLISSFFFLSSSVSSSFRPSLVAETSFFPSYSLSCPTAYSSMGSTMNNTS*

Sequence

>CNT30481150
GCAGTAATTTCATCAGTAAACCCCCCAACCAACCCAGTTCGCTCCACAACAAAATCGCCGTAGCATCAAGTCGTTGAAACATTAATTGACCCGTTTAGTC
CTCAACCAAATTCCCCCCGAAACAAAACCGCCACAACATCAAGCACGCTGAGATCATTTTACACTCAAAATGTCACTAACATCGACCAGCGAACCATGAG
GTAACCGACAGAGCCGACACACTGTAAACATTACTCGCACGCAGCTTAAAACCGCCGCCTTACGAAGCCGTCTCAAAAGACACTACCGCACCCACCACAC
TATATCACAGTCACTGACCGTCCTCAACTACCTCGCTACTTCGCCATACCTATAATTCAGATGAGGCAGGACAACAAGCGCAAAAAGGTAGCGAGAACAA
GGCAATCCCTGACAATCGAAGACAAAGAGGAAAGCTCCGCACGAGAGACCACGCATAGCAAAAAATTAGCACCTAACGATTACCAAAAAGACATATGAGA
TCTTAGTCAACCTCCTCCATCCGGCTGCCCTCCTCGGCTGAAACCCGAAGTCAGAAGCGCCGTCTCGAACAACAACATCACCAGATCCTTAACAGTCTTG
TCGCTTCTATCAGCATCCGCCCTCTTCTTCAACTCCTTCATTATCGCATTCTCTGGGTTCACCTCCATGGTCTTCTTGCTAGTCATGTAGCTGGACATAC
TGCTGTCACGCAGAGCCTGCGCCCTCATGATACGTTCCATGTTCGCAGTCCAGCCGTACTCACCTGTCACAAGACAGCATGGCGAGTCCACAATACGGTC
CGAGACGACGACCTTCTCAACCTTATCACCGAGGATCTCCTTCATCAACTTGCACAGGCTTTCAAACTCCTTTTTGATCTCCTCTTTCTTCTTCTTATCC
TCCTCGGTGTCGTCAAGCTTCAGACCCTCCTTAGTCGCAGAGACGAGCTTCTTCCCGTCGTACTCCTTGAGCTGTCCAACAGCGTACTCATCGATGGGGT
CCACCATGAACAACACTTCATAACCCCTCCTCTTCAGCTTCTCAAGGAACGGCGAGTTCTCCACCGCCTTCTTGCTCTCGCCAGTGATGTAGTAAATGTC
CTTCTGGCCATCCTTCATGCGGGTTACGTAGTCCTTCAAACTCGTCATATCGTCGCCCGACTTGGTGGAGTGATACCTCAGAAGCTCGGACAACTTGGCG
CGATTTGCACTGTCCTCGTGAATACCCAGCTTCAAGTTCTTGGAGAACGCCTCGTAGAACTTGGCGTAGTCCTCCTTGTTCTCGGAAACCTCCGCGAAGG
GGCAACAACAGGATTGACATCGGCGGCAGGATGAACCTCAGCGTCAGCCATTGCTACGACCTGGAGACCTTGCGCGGTAGAAGGAAAGCTGGCTCGACAG
GCGGGGAGCGGAG