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Detailed information on CNT30381504


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 4e-160

BLAST vs NONCODE:
NONSLYT002404, E-value = 2e-136

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675843Manihot esculentaSetaria viridis18.0936.8290.97155forward
CNT30378101Manihot esculentaArabidopsis thaliana61.4959.7583.49527forward
CNT30282434Manihot esculentaChenopodium quinoa37.4613.0883.18321forward
CNT30402788Manihot esculentaBeta vulgaris50.6434.581.57434forward
CNT30631186Manihot esculentaVigna unguiculata63.1347.7584.29541forward
CNT30711421Manihot esculentaGlycine max22.9968.6486.29197forward
CNT3094731Manihot esculentaSolanum tuberosum55.3131.5884.81474forward
CNT30298225Manihot esculentaTriticum aestivum46.5652.1683.96399forward
CNT30394033Manihot esculentaTriticum turgidum97.962.0184.98839forward
CNT30560521Manihot esculentaActinidia chinensis54.0364.3985.96463forward
CNT3013256Manihot esculentaZea mays10.1522.1988.5187forward
CNT30652736Manihot esculentaRosa chinensis28.9442.8385.89248forward
CNT30625469Manihot esculentaDaucus carota64.1836.7682.18550forward
CNT30352420Manihot esculentaEragrostis tef27.7738.4580.67238forward
CNT30477326Manihot esculentaArabidopsis halleri55.8954.1985.8479forward
CNT30362636Manihot esculentaSorghum bicolor26.624.4488.16228forward
CNT30481150Manihot esculentaChara braunii24.9715.1580.37214forward
CNT30704690Manihot esculentaPrunus avium63.8326.9288.48547forward
CNT3055928Manihot esculentaAmborella trichopoda25.3224.7284.33217forward
CNT30323609Manihot esculentaAsparagus officinalis63.8332.8583.73547forward
CNT30103353Manihot esculentaOryza rufipogon44.8138.2585.42384forward
CNT30577638Manihot esculentaOryza barthii18.224.0785.9156forward
CNT30724231Manihot esculentaLupinus angustifolius8.1728.2387.1470forward

Expression of CNT30381504

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLHSQMLLPVIGKALVESRIFFLCYFLRLPHPD

>peptide 2 (82 aa)
MILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPNTSLITLQRASNFCFSCSFFCFSSSLSSIFKPSLVAETSFLPSNSLS*

>peptide 3 (48 aa)
MLLGFFLVSNRSNGALLGTKRTALNSSWPSTEKCFTAKCSSQSLVRLL*

>peptide 4 (31 aa)
PQSLSSHDSLHVSSPPILPSDQTARRINNTV*

Sequence

>CNT30381504
TCCCGCAAAGCTTGAGCTCTCATGATTCTCTCCATGTTAGCAGTCCACCCATACTCCCCAGTGACCAAACAGCACGGAGAATCAACAACACGGTCTGAGA
CCACAACCTTCTCCACTTTATCTCCCAACACATCCTTGATAACCTTGCAAAGAGCCTCAAACTTCTGCTTCAGTTGTTCCTTCTTTTGCTTCTCATCTTC
ACTTTCATCAATTTTCAAACCTTCCTTGGTAGCTGAAACAAGCTTTTTGCCCTCAAACTCTTTGAGCTGACCAACAGCATACTCATCAATAGCATCAACC
ATGAAGAGGACCTCATAGCCCTTCTTCTTCAACTTCTCAAGGAATGGGGAGTTTTCAACTGCCTTCTTGCTTTCACCAGTGATGTAGTAGATATCACTCT
GGCCCTCCTTCATCCTAGTCACATAGTCCTTGAGACTGGTCATCTCATCACCACTCTTGGTGGAGTGATATCGAAGCAATTCAGCAATCTTTGTCTTGTT
CTGGGAATCCTCATGGATGCCAAGCTTAAGGTTCTTAGAGAATGCCTCATAGAATTTGTTGTAGTCCTCAGAATCAACAATACCCTTAACGAATCCTAGA
TACTCAGGAATCAACTCCTCACAATTGTCCATGATGAAAACACGTCGAACATAAAGCTTAATGTTGTTAGGCTTCTTTCTTGTGTCAAACAGATCAAATG
GTGCCCTCTTAGGAACAAAGAGGACAGCCTTGAACTCAAGTTGGCCCTCCACAGAGAAATGCTTCACAGCCAAATGCTCCTCCCAGTCATTGGTAAGGCT
CTTGTAGAAAGCAGAATATTCTTCCTTTGTTATTTCCTCAGGCTTCCTCATCCAGAT