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Detailed information on CNT30594767


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695840Eragrostis curvulaOryza sativa24.039.0195.1662forward
CNT30675663Eragrostis curvulaSetaria viridis23.2612.991.6760forward
CNT30305074Eragrostis curvulaTriticum aestivum21.718.9394.6456forward
CNT30224612Eragrostis curvulaHordeum vulgare24.0310.9291.9462forward
CNT30394033Eragrostis curvulaTriticum turgidum24.034.5890.3262forward
CNT30554828Eragrostis curvulaOryza glaberrima37.2118.3989.5896forward
CNT30441217Eragrostis curvulaAegilops tauschii24.038.3493.5562forward
CNT30250974Eragrostis curvulaAvena sativa24.0314.4288.7162forward
CNT30665102Eragrostis curvulaTriticum dicoccoides24.0314.9890.3262forward
CNT3012962Eragrostis curvulaZea mays23.649.3791.861forward
CNT30721901Eragrostis curvulaTriticum spelta23.6411.9690.1661forward
CNT30352420Eragrostis curvulaEragrostis tef34.8814.5495.5690forward
CNT30367015Eragrostis curvulaSorghum bicolor24.4211.2392.0663forward
CNT30371090Eragrostis curvulaOryza glumipatula24.0312.8695.1662forward
CNT30107297Eragrostis curvulaOryza longistaminata37.2121.3889.5896forward
CNT30103353Eragrostis curvulaOryza rufipogon24.036.1895.1662forward
CNT30577638Eragrostis curvulaOryza barthii36.4314.5189.3694forward
CNT30584451Eragrostis curvulaEchinochloa crusgalli23.6411.3891.861forward

Expression of CNT30594767

Peptides detected in this lncRNA

>peptide 1 (45 aa)
EDKITIILTTINVAVREYTARLTGRHSKTTEINPHNSRFRDSDQN*

Sequence

>CNT30594767
AGAGGATAAGATCACTATTATATTAACGACAATTAACGTAGCAGTTCGAGAATACACGGCACGATTAACAGGTAGACACAGCAAAACGACAGAAATAAAC
CCACACAACTCGCGGTTCAGAGACAGTGACCAGAATTAACTAGCTTCCTAAGTCGGGCATGCGAGGCGCTTAGTCGACCTCCTCCATCTTGCTCTCGCCG
GCGTCATCTTCCAACGGCGGCATGTCAGTGAGGAGCGCCGTCTCGAACAGCAGCATCA