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Detailed information on CNT30630919


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 0.0

BLAST vs NONCODE:
NONSLYT002404, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Vigna unguiculataSetaria viridis19.9742.1682.71266forward
CNT30517898Vigna unguiculataJuglans regia31.9146.9677.65425forward
CNT30378101Vigna unguiculataArabidopsis thaliana20.0530.2783.15267forward
CNT3019808Vigna unguiculataCitrullus lanatus21.3242.3987.32284forward
CNT30379140Vigna unguiculataManihot esculenta37.0158.6285.8493forward
CNT30526134Vigna unguiculataPhaseolus vulgaris41.5986.9795.85554forward
CNT30158908Vigna unguiculataPistacia vera56.6846.2180755forward
CNT30636154Vigna unguiculataCapsicum annuum18.0952.1685.06241forward
CNT30187977Vigna unguiculataSecale cereale2240.5883.28293forward
CNT30298345Vigna unguiculataTriticum aestivum15.4729.2687.38206forward
CNT30566784Vigna unguiculataActinidia chinensis24.7743.4286.06330forward
CNT30510227Vigna unguiculataSolanum lycopersicum36.1141.0885.45481forward
CNT30145670Vigna unguiculataMedicago truncatula14.1146.1988.3188forward
CNT30314068Vigna unguiculataCamelina sativa58.7151.5881.33782forward
CNT30606420Vigna unguiculataGossypium raimondii24.6257.4487.8328forward
CNT30212755Vigna unguiculataHelianthus annuus18.1796.0380.99242forward
CNT30625469Vigna unguiculataDaucus carota49.3243.9282.19657forward
CNT30688537Vigna unguiculataTriticum urartu7.8145.0285.58104forward
CNT30352420Vigna unguiculataEragrostis tef20.243.4682.16269forward
CNT30362691Vigna unguiculataSorghum bicolor30.0340.4481.75400forward
CNT30704690Vigna unguiculataPrunus avium58.4838.3484.08779forward
CNT30323609Vigna unguiculataAsparagus officinalis54.843.8482.33730forward
CNT30103353Vigna unguiculataOryza rufipogon25.9834.4683.24346forward
CNT30551470Vigna unguiculataOryza brachyantha26.882.0782.35357forward
CNT30113681Vigna unguiculataFicus carica38.5170.4778.56513forward

Expression of CNT30630919

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MHFLTKFLRMTFRILFCCSISLEMLRGRSSESTIPLTKLRYSGINSSQLSMMKTLRTYSLMLLGFFLVSKISKGALFGIKRIALNSN*

>peptide 2 (92 aa)
MLLSLNACAFMILSMFAVQPYSPVTRQHGESTTRSDTTTFSTLSPNTSFITLQRPSNFSFNSSFFFFSSSLSSSFSPSLVADTNFLPSNSFS*

>peptide 3 (81 aa)
MFFPIVGKTLVESSIFFFGNLFRFPHPDGLLFVHQRPLMRHLLNFLLFLLFLLLIFIDFLNFALLFLLLFLILIIRNLLLNS

>peptide 4 (57 aa)
KVLGSSRLKPEVRRAVSKSKRTRSLTDLSFLSASARFLSSSMMGFSGLISIVFLLDM*

Sequence

>CNT30630919
CGAAAGTGTTGGGATCATCAAGACTGAAACCAGAAGTTAGAAGAGCAGTCTCAAAGAGCAAGAGAACAAGATCCTTGACAGATTTATCATTCTTGTCGGC
ATCAGCACGCTTCCTGAGCTCATCCATGATGGGATTCTCAGGGTTAATCTCCATCGTCTTCTTGCTTGACATGTAACCAGCCATGCTGCTGTCCCTCAAT
GCCTGCGCCTTCATGATCCTTTCCATGTTCGCGGTCCAACCATATTCACCAGTCACCAGACAGCACGGAGAATCCACAACACGATCAGACACCACAACCT
TCTCCACCTTGTCACCCAACACATCCTTTATCACCTTGCAAAGACCGTCAAATTTCTCCTTCAATTCTTCCTTCTTCTTCTTCTCGTCTTCACTCTCATC
AAGTTTCAGTCCTTCCTTGGTAGCAGACACCAACTTCTTACCCTCGAACTCCTTCAGCTGACCAACTGCGTATTCATCAATAGCATCAACCATGAAAAGC
ACCTCATATCCCTTCTTTTTCAGCCTTTCCAAGAACGGGGAATTCTCCACAGCTTTCCTGCTTTCACCAGTAATGTAGTAGATGTCACTCTGTCCCTCCT
TCATCCTGGTAACATAGTCCTTCAGGCTAGTCATCTCATCACCGCTCTTGGTCGAGTGATACCTCAATAATTCAGCTAGCTTTGACTTGTTCTGGGAATC
CTCGTGAATACCCAATTTCAGGTTCTTAGAGAAGGCTTCGTAGAACTTGTTATAATCTTCCTTGTTCTCGGCAATTTCAAAGAAAAGCTCGATGCACTTC
TTAACCAAGTTCTTGCGGATGACTTTCAGGATCTTGTTTTGCTGCAGCATTTCTCTGGAGATGTTAAGAGGAAGGTCCTCAGAATCCACAATACCCTTAA
CAAAGCTAAGATATTCTGGAATCAACTCTTCGCAGTTGTCCATGATGAAGACTCTGCGTACATACAGCTTAATGTTGTTAGGCTTCTTCCTTGTGTCAAA
GATATCAAAAGGCGCCCTCTTCGGGATAAAGAGGATAGCCTTAAACTCCAACTGACCCTCAACAGAGAAGTGCTTAACAGCCAAATGTTCTTCCCAATCG
TTGGTAAGACTCTTGTAGAAAGCAGCATATTCTTCTTTGGTAATCTCTTCAGGTTTCCTCATCCAGATGGGCTTCTGTTTGTTCACCAGAGACCACTCAT
GAGACACCTCCTTAATTTTCTTCTTTTTCTTCTCTTCCTTCTCCTTATCTTCATCGACTTCCTCAACTTTGCCCTCCTCTTCCTTCTTCTCTTCCTCATC
CTCATCATCAGAAATCTCCTTCTCAATAGTCT