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Detailed information on CNT30675663


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 4e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695840Setaria viridisOryza sativa35.4823.9888.48165forward
CNT30712266Setaria viridisGlycine max21.7236.8687.13101forward
CNT30635894Setaria viridisCapsicum annuum35.4829.3184.24165forward
CNT30187559Setaria viridisSecale cereale20.6514.3994.7996forward
CNT30224390Setaria viridisHordeum vulgare37.4231.6487.36174forward
CNT30562110Setaria viridisActinidia chinensis25.5914.4184.87119forward
CNT30510308Setaria viridisSolanum lycopersicum26.0246.985.95121forward
CNT30441217Setaria viridisAegilops tauschii42.3726.5188.83197forward
CNT30250601Setaria viridisAvena sativa32.4735.5388.74151forward
CNT30665102Setaria viridisTriticum dicoccoides32.936.9686.93153forward
CNT3012962Setaria viridisZea mays47.133.6484.47219forward
CNT30227528Setaria viridisAnanas comosus27.117.3388.1126forward
CNT30126131Setaria viridisCorymbia citriodora33.1226.9281.82154forward
CNT30721901Setaria viridisTriticum spelta37.4234.1286.21174forward
CNT30352420Setaria viridisEragrostis tef69.2552.0290.68322forward
CNT30107297Setaria viridisOryza longistaminata32.0433.1890.6149forward
CNT30149846Setaria viridisBrachypodium distachyon28.1729.5790.08131forward
CNT30103353Setaria viridisOryza rufipogon69.2532.0789.13322forward
CNT30577638Setaria viridisOryza barthii32.923.6191.5153forward
CNT30584451Setaria viridisEchinochloa crusgalli63.2354.8593.54294forward
CNT30594767Setaria viridisEragrostis curvula12.923.2691.6760forward
CNT30724273Setaria viridisLupinus angustifolius33.3326.9183.87155forward

Expression of CNT30675663

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MSVSASVVSSSSMLRPSLSMRWMRLPKVLGSSRLKPEVRSAVSNSSMTRSFTDLSFLSASARLRSSSMMAFSGLISMVFLEDMYPDMLE

Sequence

>CNT30675663
ACGCAGTTCGATAATCCACCATAGCATCTAGCCCCACGTATTGCAGGCTAGGAAAAGTAATGCCACACAAAATAAACTGACAACGAGGTTCAGAAATAAC
ACCAAAAGCTAAGCTAACTCAATTCAAAAGTAAACAACCGCGCCGCTTAGTCGACCTCCTCCATCTTGCTCTCGCCGGCATCATCCTCCAGAGGGGGCAT
GTCGGTCTCAGCCTCAGTGGTCTCATCCTCGTCAATGCTCAGGCCAAGCTTGAGCATGCGGTGGATGCGGCTGCCAAAGGTGTTGGGCTCGTCAAGGCTG
AAGCCGGAAGTGAGGAGCGCAGTCTCGAACAGCAGCATGACAAGGTCCTTCACAGACTTGTCGTTCTTGTCAGCCTCAGCACGCTTGCGGAGCTCCTCCA
TGATGGCATTCTCAGGGTTGATCTCCATGGTCTTCTTGGAGGACATGTATCCGGACATGCTGGAG