Detailed information on CNT30712266


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT002404, E-value = 2e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675663Glycine maxSetaria viridis36.8621.7287.13101forward
CNT30282434Glycine maxChenopodium quinoa43.84.8986.67120forward
CNT30635894Glycine maxCapsicum annuum35.7717.4186.7398forward
CNT30187559Glycine maxSecale cereale36.514.9989100forward
CNT30298345Glycine maxTriticum aestivum52.5520.4588.89144forward
CNT30224612Glycine maxHordeum vulgare31.0214.9688.2485forward
CNT30510308Glycine maxSolanum lycopersicum36.1338.3787.8899forward
CNT30441217Glycine maxAegilops tauschii36.513.4689100forward
CNT30250974Glycine maxAvena sativa31.392088.3786forward
CNT304322Glycine maxZea mays26.2812.6190.2872forward
CNT30227528Glycine maxAnanas comosus35.7713.4890.8298forward
CNT30352420Glycine maxEragrostis tef37.9616.888.46104forward
CNT30362636Glycine maxSorghum bicolor53.6515.7690.48147forward
CNT30481150Glycine maxChara braunii48.189.3481.82132forward
CNT30107297Glycine maxOryza longistaminata36.522.2788100forward
CNT30149846Glycine maxBrachypodium distachyon36.522.5787100forward
CNT30577638Glycine maxOryza barthii36.8615.5988.12101forward
CNT30584451Glycine maxEchinochloa crusgalli27.7414.1888.1676forward

Expression of CNT30712266

Peptides detected in this lncRNA

>peptide 1 (89 aa)
FLSASARFLSSSMIGFSGLISIVFLLDMYPAMLLSNFSFNSSCFFFSSSLSSSLRPSLVAETSFLPSNSLSWPTAYSSMASTMKRTSYPF

Sequence

>CNT30712266
CGTTCTTGTCAGCATCCGCACGCTTCCTGAGCTCCTCCATGATTGGGTTCTCAGGGTTGATCTCCATTGTCTTCTTGCTTGACATGTATCCTGCCATGCT
GTTGTCAAACTTCTCCTTCAACTCCTCTTGCTTCTTCTTCTCATCTTCACTCTCGTCAAGTTTGAGACCCTCCTTGGTGGCAGAGACAAGCTTCTTGCCC
TCAAATTCCTTGAGCTGGCCAACAGCATATTCATCAATGGCATCAACCATGAAAAGAACCTCATACCCTTTCTT