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Detailed information on CNT30695840


BLAST search results

BLAST vs Swiss-Prot:
sp|Q69QQ6|HSP82_ORYSJ, E-value = 6e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675663Oryza sativaSetaria viridis23.9835.4888.48165forward
CNT30187559Oryza sativaSecale cereale24.5625.3488.17169forward
CNT30298345Oryza sativaTriticum aestivum20.0619.688.41138forward
CNT30224390Oryza sativaHordeum vulgare24.4230.5589.29168forward
CNT30394033Oryza sativaTriticum turgidum20.0610.288.41138forward
CNT30560520Oryza sativaActinidia chinensis16.5735.9684.21114forward
CNT30510308Oryza sativaSolanum lycopersicum7.8520.9390.7454forward
CNT30554828Oryza sativaOryza glaberrima60.0379.1297.58413forward
CNT30250974Oryza sativaAvena sativa18.3129.384.13126forward
CNT3012962Oryza sativaZea mays23.9825.3589.7165forward
CNT30126131Oryza sativaCorymbia citriodora18.7522.5581.4129forward
CNT30721901Oryza sativaTriticum spelta24.7133.3388.82170forward
CNT30352420Oryza sativaEragrostis tef24.4227.1493.45168forward
CNT30362691Oryza sativaSorghum bicolor23.416.2890.68161forward
CNT30371090Oryza sativaOryza glumipatula69.6299.3898.75479forward
CNT30107297Oryza sativaOryza longistaminata43.0265.92100296forward
CNT30323609Oryza sativaAsparagus officinalis20.068.2990.58138forward
CNT30149623Oryza sativaBrachypodium distachyon20.228.9688.49139forward
CNT30103269Oryza sativaOryza rufipogon77.6259.499.44534forward
CNT30577638Oryza sativaOryza barthii43.646.399.67300forward
CNT30584451Oryza sativaEchinochloa crusgalli23.6930.4192.02163forward
CNT30594767Oryza sativaEragrostis curvula9.0124.0395.1662forward

Expression of CNT30695840

Peptides detected in this lncRNA

>peptide 1 (54 aa)
IRCQQEAQFKIAYQKNCIKDRCTTTIERDGGNREKKRPIQAKNKVEIMQNKELL*

>peptide 2 (81 aa)
MSASASADSSSSMLRPSLSIRWILVPKVLGSSRLKPESLRAWAFMILSMLAVQPYSPVTRQQGESTTRSETTTFSTLSPSTS

>peptide 3 (40 aa)
MTTMALSRPPPSCSRRRRPPAAACRRQPQQTRPRRCSGRA*

Sequence

>CNT30695840
TAATCCGGTGTCAACAAGAAGCTCAGTTCAAAATAGCATATCAAAAAAATTGTATCAAAGATAGATGTACTACTACGATTGAAAGAGATGGGGGCAACAG
AGAAAAAAAAAGGCCCATTCAAGCTAAGAACAAAGTGGAGATAATGCAGAACAAAGAGTTACTATAAAAGGGCTAATGCAGAATAAGAAAATACAGATTC
TGGATTAATTAACTAGCATATTTAAATTTAAAACGTAACTGTTTGAGCAAATACCACGAAATGTTCAGGCGCTAAGATACGGCAATACCGATACATCCAG
CATAGCAAAAATGGCGAAGAGCACAGAGTCAGATAAAGCTATAGAGAACTAGGGCTCCAGGAGATGGGGGCCGAATGACAACCATGGCGCTTAGTCGACC
TCCTCCATCTTGCTCTCGCCGGCGTCGTCCTCCAGCGGCGGCATGTCGGCGTCAGCCTCAGCAGACTCGTCCTCGTCGATGCTCAGGCCGAGCTTGAGCA
TCCGGTGGATCCTGGTGCCGAAGGTGTTGGGGTCCTCAAGGCTGAAGCCGGAGTCCCTCAGAGCCTGGGCCTTCATGATCCTCTCCATGTTAGCAGTCCA
GCCATACTCCCCAGTGACTAGACAGCAGGGAGAGTCCACCACACGGTCAGAGACAACAACCTTCTCCACCTTGTCACCGAGCACCTCC