« Back to Oryza sativa search


Detailed information on CNT30695840


BLAST search results

BLAST vs Swiss-Prot:
sp|Q69QQ6|HSP82_ORYSJ, E-value = 6e-30

BLAST vs NONCODE: nothing found

Expression of CNT30695840

Peptides detected in this lncRNA

>peptide 1 (54 aa)
IRCQQEAQFKIAYQKNCIKDRCTTTIERDGGNREKKRPIQAKNKVEIMQNKELL*

>peptide 2 (81 aa)
MSASASADSSSSMLRPSLSIRWILVPKVLGSSRLKPESLRAWAFMILSMLAVQPYSPVTRQQGESTTRSETTTFSTLSPSTS

>peptide 3 (40 aa)
MTTMALSRPPPSCSRRRRPPAAACRRQPQQTRPRRCSGRA*

Sequence

>CNT30695840
TAATCCGGTGTCAACAAGAAGCTCAGTTCAAAATAGCATATCAAAAAAATTGTATCAAAGATAGATGTACTACTACGATTGAAAGAGATGGGGGCAACAG
AGAAAAAAAAAGGCCCATTCAAGCTAAGAACAAAGTGGAGATAATGCAGAACAAAGAGTTACTATAAAAGGGCTAATGCAGAATAAGAAAATACAGATTC
TGGATTAATTAACTAGCATATTTAAATTTAAAACGTAACTGTTTGAGCAAATACCACGAAATGTTCAGGCGCTAAGATACGGCAATACCGATACATCCAG
CATAGCAAAAATGGCGAAGAGCACAGAGTCAGATAAAGCTATAGAGAACTAGGGCTCCAGGAGATGGGGGCCGAATGACAACCATGGCGCTTAGTCGACC
TCCTCCATCTTGCTCTCGCCGGCGTCGTCCTCCAGCGGCGGCATGTCGGCGTCAGCCTCAGCAGACTCGTCCTCGTCGATGCTCAGGCCGAGCTTGAGCA
TCCGGTGGATCCTGGTGCCGAAGGTGTTGGGGTCCTCAAGGCTGAAGCCGGAGTCCCTCAGAGCCTGGGCCTTCATGATCCTCTCCATGTTAGCAGTCCA
GCCATACTCCCCAGTGACTAGACAGCAGGGAGAGTCCACCACACGGTCAGAGACAACAACCTTCTCCACCTTGTCACCGAGCACCTCC