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Detailed information on CNT30704690


BLAST search results

BLAST vs Swiss-Prot:
sp|P55737|HS902_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONSLYT002404, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Prunus aviumOryza sativa14.3772.8283.56292forward
CNT30675624Prunus aviumSetaria viridis12.239.387.5248forward
CNT30523621Prunus aviumSetaria italica13.2941.3583.33270forward
CNT30532263Prunus aviumEucalyptus grandis6.7421.5780.29137reverse complement
CNT30517898Prunus aviumJuglans regia18.741.9982.63380forward
CNT30378101Prunus aviumArabidopsis thaliana29.2367.3586.03594forward
CNT30282434Prunus aviumChenopodium quinoa20.1316.6683.86409forward
CNT3019808Prunus aviumCitrullus lanatus14.0742.6987.41286forward
CNT30729348Prunus aviumCorchorus capsularis33.2274.5981.78675forward
CNT3071729Prunus aviumQuercus suber8.0258.2185.28163forward
CNT30381504Prunus aviumManihot esculenta26.9263.8388.48547forward
CNT30402735Prunus aviumBeta vulgaris25.1537.5285.13511forward
CNT30526134Prunus aviumPhaseolus vulgaris26.6284.9385.03541forward
CNT30630919Prunus aviumVigna unguiculata59.6590.9984.411212forward
CNT30712364Prunus aviumGlycine max11.8160.4588.75240forward
CNT3043899Prunus aviumPrunus dulcis18.0674.7593.73367forward
CNT30158908Prunus aviumPistacia vera36.4245.2982.16740forward
CNT30635894Prunus aviumCapsicum annuum11.9142.9888.02242forward
CNT3094731Prunus aviumSolanum tuberosum23.8232.2586.16484forward
CNT30187977Prunus aviumSecale cereale13.8338.9287.19281forward
CNT30298225Prunus aviumTriticum aestivum22.9861.0587.15467forward
CNT30394033Prunus aviumTriticum turgidum30.7146.1287.02624forward
CNT30566784Prunus aviumActinidia chinensis16.1443.1688.11328forward
CNT30510227Prunus aviumSolanum lycopersicum23.4740.7384.7477forward
CNT30554909Prunus aviumOryza glaberrima6.1532.4784.8125forward
CNT30145670Prunus aviumMedicago truncatula9.0645.2186.96184forward
CNT30441217Prunus aviumAegilops tauschii20.1855.1882.68410forward
CNT30250974Prunus aviumAvena sativa5.6626.7487.83115forward
CNT30665102Prunus aviumTriticum dicoccoides6.7433.0981.75137forward
CNT30314068Prunus aviumCamelina sativa60.6881.3385.241233forward
CNT3061941Prunus aviumArabidopsis lyrata3.9931.1588.8981forward
CNT3082269Prunus aviumBrassica juncea23.1872.6984.93471forward
CNT30613762Prunus aviumArabis alpina16.0481.581.29326forward
CNT304322Prunus aviumZea mays12.9446.0684.79263forward
CNT30606420Prunus aviumGossypium raimondii16.4458.4987.43334forward
CNT30227528Prunus aviumAnanas comosus12.6535.3587.94257forward
CNT30652736Prunus aviumRosa chinensis22.1577.7290.22450forward
CNT30212755Prunus aviumHelianthus annuus9.475.7984.29191forward
CNT30625469Prunus aviumDaucus carota55.0274.7384.081118forward
CNT30688537Prunus aviumTriticum urartu4.1836.889.4185forward
CNT30352420Prunus aviumEragrostis tef22.4973.8382.49457forward
CNT30477326Prunus aviumArabidopsis halleri23.6254.385.21480forward
CNT30362691Prunus aviumSorghum bicolor19.6940.4484.25400forward
CNT30154320Prunus aviumPrunus persica11.6163.9697.88236forward
CNT30481150Prunus aviumChara braunii25.9437.378.75527forward
CNT30418103Prunus aviumPapaver somniferum15.9983.3384.31325forward
CNT3055928Prunus aviumAmborella trichopoda10.8325.0685.91220forward
CNT30107297Prunus aviumOryza longistaminata5.8626.586.55119forward
CNT3022206Prunus aviumPopulus trichocarpa11.1241.5486.28226forward
CNT30323609Prunus aviumAsparagus officinalis57.3870.0386.021166forward
CNT30149623Prunus aviumBrachypodium distachyon7.3831.2588.67150forward
CNT30103353Prunus aviumOryza rufipogon29.9260.5685.53608forward
CNT30577638Prunus aviumOryza barthii14.4245.2284.64293forward
CNT30584451Prunus aviumEchinochloa crusgalli8.1730.9786.14166forward
CNT30558289Prunus aviumPanicum hallii9.2532.0384.57188forward
CNT30551470Prunus aviumOryza brachyantha15.4572.1886.62314forward
CNT30113681Prunus aviumFicus carica21.3159.4880.6433forward
CNT30724273Prunus aviumLupinus angustifolius11.8141.6787.08240forward

Expression of CNT30704690

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MVGWGGFQTHHLINFLHLAALSISISVLQWGHLSITVNSIVVNAQSKLQHSVDPVAEGVGVIKAEPRCEESSLKQKENKVLH*

>peptide 2 (82 aa)
MILSMLAVQPYSPVTKQQGESTTRSDTTTFSTLSPKTSFTTLQSPSNFSFNSSFFFASSSLSSSLRPSLVAETSFLPSNSLS*

>peptide 3 (81 aa)
MLNPSFNILWILLPKVLGSSRLNPDVRRAVSNRRRTRSFTDLSFLSASALFLSSSMMGFSGLISMVFLLDMYPAMLLSLKA*

>peptide 4 (71 aa)
MEKKLLLDGGLGGFSDTPLNQLPPSCCPQHQHQRPPMGASQHHRQQHRRQCSIQASTFCGSCCRRCWGHQG*

>peptide 5 (57 aa)
MHFFTKFLRMTFKILFCCNISLEMLRGRSSESTIPLTKPRYSGISSSQLSMMKTRRT*

>peptide 6 (49 aa)
SQVSIKTNRSQTTETAVGDNSSKCINKKMVIIISDNKNSSNHPKISKIN*

>peptide 7 (29 aa)
MTRKTCCSLPCSQQSLGTSQCTSSPSFCG*

>peptide 8 (29 aa)
MLLNQILEVKSNLCTPAKNLTRVVSGDCE*

Sequence

>CNT30704690
TTCACAAGTAAGCATCAAGACTAATAGAAGCCAAACCACAGAAACAGCCGTAGGAGACAATAGTTCCAAATGCATTAACAAAAAGATGGTAATTATAATA
TCCGATAACAAAAACAGCAGTAACCATCCCAAAATATCCAAAATTAACTAAAGAAAGTAAGAAAATATAACATCACTAATATGGAGAAAAAACTACTGCT
GGATGGTGGGTTGGGGGGGTTTTCAGACACACCACTTAATCAACTTCCTCCATCTTGCTGCCCTCAGCATCAGCATCAGCGTCCTCCAATGGGGGCATCT
CAGCATCACCGTCAACAGCATCGTCGTCAATGCTCAATCCAAGCTTCAACATTCTGTGGATCCTGTTGCCGAAGGTGTTGGGGTCATCAAGGCTGAACCC
AGATGTGAGGAGAGCAGTCTCAAACAGAAGGAGAACAAGGTCCTTCACTGACTTGTCATTCTTGTCTGCATCAGCCCTCTTTCTCAGCTCCTCCATGATG
GGGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATGTACCCAGCCATGCTGTTATCCCTCAAGGCCTGAGCCTTCATGATTCTTTCCATGTTGG
CAGTCCAGCCATACTCACCTGTCACCAAACAGCAAGGAGAGTCGACCACACGGTCAGACACCACAACCTTCTCCACTCTGTCACCCAAAACATCCTTCAC
AACCTTGCAGAGTCCCTCAAACTTCTCCTTCAACTCTTCCTTCTTCTTTGCCTCGTCTTCACTCTCATCAAGCTTGAGACCTTCCTTGGTGGCTGAGACA
AGCTTCTTGCCCTCAAACTCCTTGAGCTGACCAACAGCATACTCATCAATAGCATCAACCATGAAGAGGACCTCATATCCCTTCTTCTTCAGCTTCTCAA
GGAATGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCGGTGATGTAGTAAATATCACTCTGGCCCTCCTTCATCCTTGTCACATAGTCCTTGAGACTGGT
CATCTCTTCACCGCTCTTGGTGGAGTGATATCTGAGCAACTCAGCAAGCTTTGTCTTGTTCTGGGAGTCCTCATGGATTCCAAGCTTGAGGTTCTTGGAG
AATGACTCGTAAAACTTGTTGTAGTCTTCCTTGTTCTCAGCAATCTCTTGGAACATCTCAATGCACTTCTTCACCAAGTTTTTGCGGATGACCTTCAAGA
TCTTGTTTTGCTGCAACATCTCTCTTGAAATGTTAAGAGGGAGATCCTCAGAGTCCACAATACCCTTAACAAAGCCAAGGTATTCAGGGATCAGCTCCTC
ACAGTTGTCCATGATGAAGACACGGCGGACATAGAGCTTGATGTTGTTGGGCTTCTTCCTTGTGTCAAAGAGATCAAATGGAGCCCTCTTGGGAACAAAG
AGGATGGCCTTGAACTCAAGCTGACCCTCAACTGAAAAGTGCTTCACAGAAAGGTGCTCCTCCCAGTCATTGGTAAGACTCTTGTAGAAAGCTGAATACT
CTTCCTTAGTGATCTCCTCTGGCTTCCTCATCCAGATAGGTTTTTGCTTGTTCACCAAAGACCATTCATGTGACACTTCCTGGATCTTCTTCTTTTTCTT
CTCTTCCTTTTCTTTCTCTTCATCAACATCCTCAACCTTTCCTTCCTCATCCTTCTTTTCTTCCTCATCTTCGTCATCAGAAATCTCCTTCTCAGTGGTC
TTCTCAATCCAGAGTGAGATTGGGTAGCTGATGAACTCAGAATGCTTCTTAACCAAATCCTTGAGGTGAAGAGTAATCTTTGTACCCCTGCCAAGAACCT
CACCAGAGTTGTCTCTGGTGACTGTGAATGAGCCTCCAGCTTGAGACTCCCACACATATTGCTCGTCATCATTGTGCTTGGTGGTAACAATAACCTTGTC
TGCAACAAGATAAGCAGAGTAGAACCCAACACCAAACTGACCGATCATGCTAACATCAGCACCAGCAGCCAAAGCTTCCATAAATTCCTTGGTGCCAGAC
CTTGCAATGGTACCGAGGTTGTTCACCAAATC