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Detailed information on CNT30154837


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LF98|ALFC8_ARATH, E-value = 4e-125

BLAST vs NONCODE:
NONPOPT000956, E-value = 9e-105

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690595Prunus persicaOryza sativa19.7420.3181.32182forward
CNT30670698Prunus persicaSetaria viridis17.3536.4580.62160forward
CNT30522989Prunus persicaSetaria italica25.625.478.81236forward
CNT30513666Prunus persicaJuglans regia54.1297.0885.97499forward
CNT30374131Prunus persicaArabidopsis thaliana36.3366.7380335forward
CNT30615958Prunus persicaSesamum indicum27.4450.9184.98253forward
CNT30282161Prunus persicaChenopodium quinoa22.6737.3979.9209forward
CNT30729011Prunus persicaCorchorus capsularis23.131.7483.1213forward
CNT30526127Prunus persicaPhaseolus vulgaris21.6942.2882200forward
CNT30493761Prunus persicaOlea europaea12.5843.4584.48116forward
CNT30158302Prunus persicaPistacia vera15.1832.1884.29140forward
CNT30636619Prunus persicaCapsicum annuum34.2740.5684.49316forward
CNT30222288Prunus persicaHordeum vulgare24.9554.3780.87230forward
CNT30564032Prunus persicaActinidia chinensis22.7857.0780.95210forward
CNT3085640Prunus persicaVigna radiata30.2652.4482.08279forward
CNT30145818Prunus persicaMedicago truncatula24.6222.3681.94227forward
CNT3061869Prunus persicaArabidopsis lyrata15.2922.9382.27141forward
CNT3074945Prunus persicaBrassica juncea33.7333.5177.81311forward
CNT30612844Prunus persicaArabis alpina30.842.8479.58284forward
CNT30458863Prunus persicaSaccharum spontaneum60.7440.0977.5560forward
CNT304578Prunus persicaZea mays31.2452.1779.51288forward
CNT30609114Prunus persicaGossypium raimondii35.6850.7780.85329forward
CNT30650515Prunus persicaRosa chinensis58.2468.3286.22537forward
CNT30717283Prunus persicaMalus domestica golden48.767.0185.97449forward
CNT30625244Prunus persicaDaucus carota36.3350.9182.99335forward
CNT30349462Prunus persicaEragrostis tef23.9731.9480.09221forward
CNT30479170Prunus persicaArabidopsis halleri24.8454.1481.22229forward
CNT30622084Prunus persicaCajanus cajan32.2139.9781.48297forward
CNT30433772Prunus persicaPapaver somniferum55.8636.7679.61515forward
CNT30643281Prunus persicaCannabis sativa37.3188.8982.56344forward
CNT3026774Prunus persicaPopulus trichocarpa51.1956.9481.99472forward
CNT30120586Prunus persicaCitrus clementina24.467.3784.44225forward
CNT3036222Prunus persicaCucumis melo17.3543.7286.25160forward
CNT30149431Prunus persicaBrachypodium distachyon16.8132.1682.58155forward
CNT3099714Prunus persicaOryza rufipogon19.7420.5281.32182forward
CNT30113854Prunus persicaFicus carica29.8338.7984.36275forward
CNT30724887Prunus persicaLupinus angustifolius31.8922.0783.33294forward
CNT3039557Prunus persicaMarchantia polymorpha20.3924.4280.32188forward

Expression of CNT30154837

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MSWDPSTRISGSTMGTRPFSWQMIAYRANPLAFSLIES*

>peptide 2 (48 aa)
MSMSTSPTKTSDINNKKLFMLANRSSSFYHILLVTGNNLVKAEIRKKT*

>peptide 3 (86 aa)
MKDRVHGFFPFNLFMALRLRVASSSLCPPDKKTTAGTATGMVRCKERTVCSAITSGATFGESDPGVTMLGFKRVPSSRTWWSLRAL*

>peptide 4 (58 aa)
MVVVKSFVACSKNTFGHLSTLVNVMGSINQDLWLNNGDQAILLADDSISGQPIGILID*

>peptide 5 (36 aa)
MQQEHVRSPQHTCECHGIHQPGSLAQQWGPGHSPGR*

Sequence

>CNT30154837
GAAGAATTGGGTCAGAAAGATAAAAAGAAGTACAAAATAGGTACGAAAAACTTGGCAATAAAAGCAGATTACCCAAATACATGAGCATGAGCACTTCACC
AACCAAAACGAGCGACATAAACAACAAAAAACTCTTCATGCTTGCAAACCGTTCCTCAAGCTTTTATCATATTCTACTAGTAACTGGCAATAATCTCGTC
AAGGCAGAGATTAGAAAGAAAACTTGAAAAAGAACCTACACTACGACACCAAAACACCGTTTTTGTAAGAGCAAAATCATTGGCTTTTACACAGCTCTGC
ATCAATACTTATAGTCCTTGACATGAAGGATAGAGTCCATGGTTTCTTCCCCTTCAATTTGTTCATGGCATTGAGGTTGAGGGTAGCCTCCTCCTCACTC
TGCCCACCGGACAAGAAAACCACGGCAGGAACAGCCACAGGCATGGTGCGCTGCAAGGAACGGACTGTGTGCTCAGCAATCACCTCTGGTGCAACCTTTG
GTGAATCAGATCCCGGAGTCACCATGTTAGGCTTCAAGAGAGTTCCTTCAAGCAGAACATGGTGGTCGTTAAGAGCTTTGTAGCATGCAGCAAGAACACG
TTCGGTCACCTCAGCACACTTGTGAATGTCATGGGATCCATCAACCAGGATCTCTGGCTCAACAATGGGGACCAGGCCATTCTCCTGGCAGATGATAGCA
TATCGGGCCAACCCATTGGCATTCTCATTGATTGAGAGCTGAGATGGCTCACTGGGGCCAATATTGAGCACAGCACGCCATTTTGCAAACCGAGCACCAG
CTTCATAGTACTTTTTGCAACGCTCTCCAAGGCCATCCAGACCCTGGGTTGTGGTCTCACCATTGGTACCAGCAAGCTCAACAGTGCCCTTGTCAACCTT
GATGCCAGGGAGAACACCGCCT