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Detailed information on CNT30526127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513666Phaseolus vulgarisJuglans regia42.9239.4981.77203forward
CNT3021292Phaseolus vulgarisCitrullus lanatus39.7527.9884.57188forward
CNT30636709Phaseolus vulgarisCapsicum annuum21.1416.8982100forward
CNT30568685Phaseolus vulgarisActinidia chinensis20.088.4783.1695forward
CNT3085859Phaseolus vulgarisVigna radiata63.6462.8493.36301forward
CNT30145974Phaseolus vulgarisMedicago truncatula29.8144.3484.4141forward
CNT30609114Phaseolus vulgarisGossypium raimondii43.9732.181.73208forward
CNT30625244Phaseolus vulgarisDaucus carota45.2432.5282.71214forward
CNT30622084Phaseolus vulgarisCajanus cajan68.7143.7489.54325forward
CNT30154837Phaseolus vulgarisPrunus persica42.2821.6982200forward
CNT30571536Phaseolus vulgarisVitis vinifera36.5834.5382.66173forward
CNT3026774Phaseolus vulgarisPopulus trichocarpa41.4423.6479.08196forward
CNT30120586Phaseolus vulgarisCitrus clementina39.5355.9983.96187forward
CNT3036222Phaseolus vulgarisCucumis melo16.4921.3184.6278forward
CNT30724801Phaseolus vulgarisLupinus angustifolius27.4810.3889.23130forward

Expression of CNT30526127

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MALRLRDASSSLCPPDKKTTAGTAAGTVRCRALTVCSATT*

Sequence

>CNT30526127
CTGGGAGGAGTAAAATCACAATACTCATTAGCAAGAACCCATAATACCGATTCCTACCCGCACTAGTCTCAGAAAAGAGCAGTAACTTTTCTCAGTATTT
GTAGTTCTCAACATAGAGTTAGCCTTGGCTCTTACCAATAAGGCTTCTTGAGCCTTCTTCACATTCTCCTCTTTTCCACCCCATGCCTTAAGAGTGCTCT
GTTGAAGTGCCCTTCCAAAAGAGAAAGAGAGTGACCATGGCTTCTTCCCATTAACCTGGTTAATGGCATTGAGGTTGAGGGATGCCTCTTCCTCACTCTG
CCCACCAGACAAGAAAACCACGGCAGGAACTGCAGCAGGTACAGTCCGCTGCAGGGCTCTAACAGTGTGTTCAGCAACCACCTGAGGAGAAACCTTGGCA
GATTTAGATCCAGGTGTAACCATGTTTGGCTTCAAAAGAGTTCCCTCGAGAAGAACATGGTGATCATTCAAAG