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Detailed information on CNT3039557


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LF98|ALFC8_ARATH, E-value = 5e-105

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513666Marchantia polymorphaJuglans regia23.6435.4179.12182forward
CNT30154837Marchantia polymorphaPrunus persica24.4220.3980.32188forward

Expression of CNT3039557

Peptides detected in this lncRNA

>peptide 1 (36 aa)
HRFEGNRANAKSKFPNVSLFNVRRPDTCKTNLHRVL*

>peptide 2 (32 aa)
MQNKLAPCSINFQQPQEISFSSTFFQEEDLYC*

>peptide 3 (53 aa)
MPGTAGGTVLWSALTVYLAITSGVTFGASAPGVTMLGLRSVPSRRTCCSFRAL*

Sequence

>CNT3039557
CATAGATTTGAAGGAAATAGAGCAAATGCTAAGAGTAAATTTCCCAATGTTTCTCTGTTTAACGTAAGGAGACCAGACACATGCAAAACAAACTTGCACC
GTGTTCTATAAATTTTCAACAGCCACAAGAGATCTCGTTTTCATCTACGTTTTTTCAAGAAGAAGACTTATACTGTTAATACTTGTAGTCTTTTACGTAT
AAACTCTCCGAGGTCCCTGAGCTGGCTGCGTCCCCCTTGTATTTCCCGAGAGTGGCTTCAGAATTAGCTTTCCCTCGAACGAATAATATTTTTTGCGCAG
AAGGCACATTTTTCTTTTCTCCTCCCCAAGTTTTGAGAACACTTTGCTGCAGGGCACGTCCGTATGAGAAGGACAAGGTCCAGGGTTTGATTGTATCGAG
TGCATTCATTGCATTGAGATTTACCGTTGCTTCCTCTTCACTTTGGCCTCCAGAGAGGAAGACAATGCCTGGAACGGCTGGTGGCACAGTTCTCTGGAGT
GCCCTGACGGTGTACTTGGCAATAACTTCTGGCGTAACTTTTGGTGCGTCCGCACCGGGGGTAACCATGTTAGGCTTAAGGAGTGTTCCCTCAAGAAGAA
CGTGTTGTTCGTTTAGAGCTTTGTAACAAGCGGCCAACACACGTTCGGTCACTTCTGCACACTTTCGAATATCATGAGAACCATCCACTAATATTTCAGG
TTCTACAATCGGGACAAGTCCATTTTCTTGACAAATGATAGCATATCGGGCTAGGCCTTGAGCATTCTGT