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Detailed information on CNT30625244


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690595Daucus carotaOryza sativa20.0614.7382.58132forward
CNT30671170Daucus carotaSetaria viridis14.4432.8783.1695forward
CNT30513666Daucus carotaJuglans regia49.5463.4285.28326forward
CNT30374131Daucus carotaArabidopsis thaliana19.9126.181.68131forward
CNT30615958Daucus carotaSesamum indicum27.8136.8283.61183forward
CNT30282161Daucus carotaChenopodium quinoa41.7949.1981.09275forward
CNT3021292Daucus carotaCitrullus lanatus20.0619.6481.82132forward
CNT30729011Daucus carotaCorchorus capsularis21.7321.3183.22143forward
CNT30526127Daucus carotaPhaseolus vulgaris32.5245.2482.71214forward
CNT30493761Daucus carotaOlea europaea13.6833.7188.8990forward
CNT30636619Daucus carotaCapsicum annuum44.3837.4880.82292forward
CNT30222685Daucus carotaHordeum vulgare18.5441.583.61122forward
CNT30564033Daucus carotaActinidia chinensis28.5735.8182.98188forward
CNT3085859Daucus carotaVigna radiata33.4345.9383.18220forward
CNT30552124Daucus carotaOryza glaberrima20.0614.2583.33132forward
CNT30145974Daucus carotaMedicago truncatula13.5327.9984.2789forward
CNT30458863Daucus carotaSaccharum spontaneum52.1324.5579.01343forward
CNT3015043Daucus carotaZea mays36.3248.7878.24239forward
CNT30609114Daucus carotaGossypium raimondii24.7725.1583.44163forward
CNT30650515Daucus carotaRosa chinensis65.0554.4581.31428forward
CNT30717283Daucus carotaMalus domestica golden47.5746.7282.75313forward
CNT30364112Daucus carotaSorghum bicolor35.2626.3679.31232forward
CNT30622084Daucus carotaCajanus cajan63.2255.9981.73416forward
CNT30154837Daucus carotaPrunus persica50.9136.3382.99335forward
CNT30433772Daucus carotaPapaver somniferum46.8121.9882.14308forward
CNT30571536Daucus carotaVitis vinifera32.2242.3286.79212forward
CNT30643281Daucus carotaCannabis sativa1932.384125forward
CNT3026774Daucus carotaPopulus trichocarpa46.8137.1581.17308forward
CNT30120586Daucus carotaCitrus clementina32.6764.3781.86215forward
CNT3036222Daucus carotaCucumis melo16.2629.2384.11107forward
CNT30113854Daucus carotaFicus carica56.3852.3379.25371forward

Expression of CNT30625244

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MALRLTVACSSLWPPDKNTTAGTAGGIVR*

Sequence

>CNT30625244
ACAGATCTCAATAGTAAATAAGTTTAGAGGGTTACAAGCTTATTCTGAAGTCTTTTTGTAGTTTTCATAAAAGAAAATACTAACCCAAACTAAAAATCCA
AGATATCCGAAAATAAAACTCTTGCAAATACTAACTTGTAATCCATAAAACAAGGGGAATTGCAGACCCCAAAATACTCAGTACTTGTAGTCCTTGACGT
GAAGGCTCTCAGAGCTGCTTTCACGTTTTCTTCTTTTCCTCCCCAAGCCTTAAGAGTGCTCTGCTGAAGAGCCCTTCCAAAGGAGAAAGACAGGCTCCAT
GGCTTCTTCGTCTGAAGCTTGTTCATGGCATTGAGGTTGACAGTTGCCTGCTCCTCACTCTGGCCACCAGACAAAAACACAACTGCAGGAACAGCAGGAG
GCATAGTTCGCTGAAGGGCACGAACAGTGTACTCAGCAATCACCTCGGGGGTAACCTTTTCAGCATCGGAACCTGGGGTAACCATGTTGGGTTTCAAGAG
AGTTCCTTCAAGCAGGACTTTGTGATCATTGAGTGCCTTGTAGCAAGCAGCAAGTACACGTTCGGTCACATCAGCACACTTGTTAATATCATGAGGTCCA
TCGACCAAAATCTCAGGCTCAACAATTGGCACCAAGCCATTCTCCTGGCAGATTATGG